C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: polymerase (DNA-directed), delta interacting protein 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000100227 POLDIP3 9606 - 22:42583721-42614962 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000252115 POLDIP3-001 42583721-42614962 protein_coding
  ENST00000339677 POLDIP3-201 42584984-42614857 protein_coding
  ENST00000348657 POLDIP3-002 42583721-42614931 protein_coding
  ENST00000445215 POLDIP3-003 42583721-42614869 nonsense_mediated_decay
  ENST00000451060 POLDIP3-202 42583722-42614962 protein_coding
  ENST00000454057 POLDIP3-005 42597708-42614860 nonsense_mediated_decay
  ENST00000463133 POLDIP3-004 42602768-42614877 processed_transcript
  ENST00000491021 POLDIP3-006 42585887-42603012 processed_transcript
  ENST00000617178 POLDIP3-203 42583722-42614911 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000252115ENST00000339677ENST00000348657ENST00000445215ENST00000451060ENST00000454057ENST00000463133ENST00000491021ENST00000617178
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000252115 12.625±0.00 7.119±0.00 1.759±0.00 6.905±6.10 8.551±7.14 12.144±0.00 5.343±4.10 24.955±0.00 5.854±2.68 11.891±6.08 13.111±0.00 28.552±25.37 19.841±9.15 15.967±6.07
ENST00000339677 N/A N/A N/A 3.505±0.00 N/A N/A 1.226±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000348657 N/A 5.217±0.00 N/A 1.497±0.00 N/A N/A N/A 2.112±0.00 N/A 8.328±0.00 2.315±0.00 13.727±0.00 6.651±3.28 5.351±0.00
ENST00000445215 N/A 1.900±0.00 N/A N/A N/A 8.750±0.00 N/A N/A N/A N/A 3.055±0.00 N/A N/A 8.070±0.00
ENST00000451060 N/A N/A 0.574±0.00 0.690±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000454057 N/A N/A N/A N/A 3.111±0.00 N/A N/A N/A 3.584±0.00 N/A N/A 3.641±0.00 N/A N/A
ENST00000463133 N/A N/A 4.485±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000491021 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 9.810±0.00
ENST00000617178 N/A N/A N/A 3.691±0.00 N/A 8.241±0.00 N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004LM CIL_0004LM_0001 CGP 22:42583721-42649568

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0000346 IDA transcription export complex
GO:0003676 IEA nucleic acid binding
GO:0005515 IPI protein binding
GO:0005737 TAS cytoplasm
GO:0016607 IDA nuclear speck
GO:0016973 IDA poly(A)+ mRNA export from nucleus
GO:0035145 IDA exon-exon junction complex
GO:0044822 IDA poly(A) RNA binding
GO:0045727 IMP positive regulation of translation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000091032 POLDIP3 polymerase (DNA-directed), delta interacting protein 3 protein_coding Danio_rerio
ENSMUSG00000041815 Poldip3 polymerase (DNA-directed), delta interacting protein 3 protein_coding Mus_musculus

Loading