C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: polymerase (DNA-directed), delta interacting protein 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000348657 POLDIP3-002 ENSG00000100227 9606 - 22:42583721-42614931 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainKidneyLungMuscleOvaryPlacentaTestisENST00000348657
Transcript ID Adrenal Brain Kidney Lung Muscle Ovary Placenta Testis
ENST00000348657 5.217±0.00 1.497±0.00 2.112±0.00 8.328±0.00 2.315±0.00 13.727±0.00 6.651±3.28 5.351±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004LM CIL_0004LM_0001 CGP 22:42583721-42649568

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0000346 IDA transcription export complex
GO:0003676 IEA nucleic acid binding
GO:0005515 IPI protein binding
GO:0005737 TAS cytoplasm
GO:0016607 IDA nuclear speck
GO:0016973 IDA poly(A)+ mRNA export from nucleus
GO:0035145 IDA exon-exon junction complex
GO:0044822 IDA poly(A) RNA binding
GO:0045727 IMP positive regulation of translation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000100375 Poldip3-003 protein_coding Mus_musculus 0 1604
ENSMUST00000129372 Poldip3-005 protein_coding Mus_musculus 0 538
ENSMUST00000150926 Poldip3-004 retained_intron Mus_musculus 0 536
ENSMUST00000149802 Poldip3-002 retained_intron Mus_musculus 0 536
ENSMUST00000058793 Poldip3-001 protein_coding Mus_musculus 0 536

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