C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: Sad1 and UNC84 domain containing 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000100242 SUN2 9606 - 22:38734725-38794143 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000405018 SUN2-002 38734736-38755999 protein_coding
  ENST00000405510 SUN2-001 38734725-38755528 protein_coding
  ENST00000406622 SUN2-017 38735909-38794143 protein_coding
  ENST00000417332 SUN2-010 38751007-38754775 protein_coding
  ENST00000420859 SUN2-008 38750225-38754951 protein_coding
  ENST00000430185 SUN2-011 38745075-38750314 protein_coding
  ENST00000433561 SUN2-003 38750992-38755634 protein_coding
  ENST00000438058 SUN2-009 38745687-38756000 protein_coding
  ENST00000439339 SUN2-006 38751020-38755429 protein_coding
  ENST00000452294 SUN2-005 38750888-38754982 protein_coding
  ENST00000455125 SUN2-015 38737760-38739423 protein_coding
  ENST00000456894 SUN2-004 38748713-38754993 protein_coding
  ENST00000464202 SUN2-012 38740292-38742578 retained_intron
  ENST00000469086 SUN2-013 38739341-38742481 retained_intron
  ENST00000470642 SUN2-014 38738238-38739247 retained_intron
  ENST00000477262 SUN2-019 38738926-38742438 retained_intron
  ENST00000480307 SUN2-018 38749766-38751441 retained_intron
  ENST00000494273 SUN2-007 38750898-38754943 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBreastColonHeartLiverLungMuscleOvaryTestisENST00000405018
Transcript ID Adipose Bladder Breast Colon Heart Liver Lung Muscle Ovary Testis
ENST00000405018 31.187±0.00 2.104±0.00 78.669±0.00 48.188±45.95 16.180±0.00 18.312±0.00 18.803±15.74 62.672±0.00 13.436±7.59 18.817±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001ZY CIL_0001ZY_0001 CGP 22:38685543-38738299
CIL_0002XF CIL_0002XF_0001 CGP 22:38705723-38794143
CIL_0005NJ CIL_0005NJ_0001 CGP 22:38734725-38794198

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000784 IEA nuclear chromosome, telomeric region
GO:0000794 IEA condensed nuclear chromosome
GO:0005515 IPI protein binding
GO:0005521 IDA lamin binding
GO:0005635 TAS nuclear envelope
GO:0005637 IEA nuclear inner membrane
GO:0005768 IEA endosome
GO:0006998 IGI nuclear envelope organization
GO:0007052 TAS mitotic spindle organization
GO:0007097 TAS nuclear migration
GO:0008017 TAS microtubule binding
GO:0016021 IEA integral component of membrane
GO:0030335 ISS positive regulation of cell migration
GO:0031022 ISS nuclear migration along microfilament
GO:0031965 IDA nuclear membrane
GO:0034993 IDA SUN-KASH complex
GO:0042802 IPI identical protein binding
GO:0051642 ISS centrosome localization
GO:0090286 IDA cytoskeletal anchoring at nuclear membrane
GO:0090292 IDA nuclear matrix anchoring at nuclear membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000086490 SUN2 Sad1 and UNC84 domain containing 2 protein_coding Danio_rerio
ENSMUSG00000042524 Sun2 Sad1 and UNC84 domain containing 2 protein_coding Mus_musculus

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