C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Region Summary |
| CIL_0002XF_0001 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSG00000100226-ENSG00000100242 | CGP | 9606 | 22:38705723-38794143  |
|
| Gene | Transcript | Position | Biotype | |
ENSG00000100226  (GTPBP1)GTP binding protein 1 |
ENST00000216044 (GTPBP1-001)
|
38705723-38733587 | protein_coding | |
|
ENST00000418601 (GTPBP1-004)
|
38705949-38721822 | nonsense_mediated_decay | ||
|
ENST00000458073 (GTPBP1-010)
|
38726306-38738299 | protein_coding | ||
|
ENST00000460605 (GTPBP1-006)
|
38725176-38726428 | processed_transcript | ||
|
ENST00000461428 (GTPBP1-015)
|
38706118-38716240 | retained_intron | ||
|
ENST00000462332 (GTPBP1-002)
|
38728256-38732239 | retained_intron | ||
|
ENST00000470836 (GTPBP1-011)
|
38706520-38715962 | protein_coding | ||
|
ENST00000475959 (GTPBP1-007)
|
38725807-38726388 | retained_intron | ||
|
ENST00000484657 (GTPBP1-003)
|
38705742-38716867 | protein_coding | ||
|
ENST00000484971 (GTPBP1-016)
|
38730613-38736184 | nonsense_mediated_decay | ||
|
ENST00000487538 (GTPBP1-017)
|
38734324-38736175 | nonsense_mediated_decay | ||
|
ENST00000488787 (GTPBP1-005)
|
38706511-38716669 | protein_coding | ||
|
ENST00000489527 (GTPBP1-018)
|
38734325-38738295 | protein_coding | ||
|
ENSG00000100242 (SUN2) Sad1 and UNC84 domain containing 2 |
ENST00000405018 (SUN2-002)
|
38734736-38755999 | protein_coding | |
|
ENST00000405510 (SUN2-001)
|
38734725-38755528 | protein_coding | ||
|
ENST00000406622 (SUN2-017)
|
38735909-38794143 | protein_coding | ||
|
ENST00000417332 (SUN2-010)
|
38751007-38754775 | protein_coding | ||
|
ENST00000420859 (SUN2-008)
|
38750225-38754951 | protein_coding | ||
|
ENST00000430185 (SUN2-011)
|
38745075-38750314 | protein_coding | ||
|
ENST00000433561 (SUN2-003)
|
38750992-38755634 | protein_coding | ||
|
ENST00000438058 (SUN2-009)
|
38745687-38756000 | protein_coding | ||
|
ENST00000439339 (SUN2-006)
|
38751020-38755429 | protein_coding | ||
|
ENST00000452294 (SUN2-005)
|
38750888-38754982 | protein_coding | ||
|
ENST00000455125 (SUN2-015)
|
38737760-38739423 | protein_coding | ||
|
ENST00000456894 (SUN2-004)
|
38748713-38754993 | protein_coding | ||
|
ENST00000464202 (SUN2-012)
|
38740292-38742578 | retained_intron | ||
|
ENST00000469086 (SUN2-013)
|
38739341-38742481 | retained_intron | ||
|
ENST00000470642 (SUN2-014)
|
38738238-38739247 | retained_intron | ||
|
ENST00000477262 (SUN2-019)
|
38738926-38742438 | retained_intron | ||
|
ENST00000480307 (SUN2-018)
|
38749766-38751441 | retained_intron | ||
|
ENST00000494273 (SUN2-007)
|
38750898-38754943 | retained_intron | ||
|
ENSG00000100246 (DNAL4) dynein, axonemal, light chain 4 |
ENST00000216068 (DNAL4-001)
|
38778508-38794173 | protein_coding | |
|
ENST00000406199 (DNAL4-002)
|
38780718-38794198 | protein_coding | ||
|
ENST00000475512 (DNAL4-004)
|
38785305-38794132 | processed_transcript | ||
|
ENST00000486019 (DNAL4-003)
|
38778853-38794148 | processed_transcript | ||
|
ENSG00000229598 (PRDX3P1) peroxiredoxin 3 pseudogene 1 |
ENST00000418695 (PRDX3P1-001)
|
38722743-38723505 | processed_pseudogene | |
|
ENSG00000272669 (RP3-508I15.21) |
ENST00000609212 (RP3-508I15.21-001)
|
38742625-38743115 | antisense | |
|
ENSG00000273076 (RP3-508I15.22) |
ENST00000607991 (RP3-508I15.22-001)
|
38743495-38743910 | antisense | |
|
ENSG00000273096 (RP3-508I15.20) |
ENST00000609428 (RP3-508I15.20-001)
|
38736610-38736792 | sense_intronic | |
| CIL_0002XF_0002 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSMUSG00000042535-ENSMUSG00000042524 | CGP | 10090 | 15:79690895-79742536 |
|
| Gene | Transcript | Position | Biotype | |
|
ENSMUSG00000042524 (Sun2) Sad1 and UNC84 domain containing 2 |
ENSMUST00000046259 (Sun2-002)
|
79724073-79742536 | protein_coding | |
|
ENSMUST00000089311 (Sun2-001)
|
79724070-79742534 | protein_coding | ||
|
ENSMUST00000100439 (Sun2-003)
|
79724071-79742504 | protein_coding | ||
|
ENSMUST00000159660 (Sun2-007)
|
79738650-79742115 | protein_coding | ||
|
ENSMUST00000159762 (Sun2-004)
|
79729613-79742504 | retained_intron | ||
|
ENSMUST00000160355 (Sun2-009)
|
79739839-79742092 | protein_coding | ||
|
ENSMUST00000162064 (Sun2-010)
|
79734108-79735951 | retained_intron | ||
|
ENSMUST00000162392 (Sun2-006)
|
79724070-79742456 | retained_intron | ||
|
ENSMUST00000162499 (Sun2-008)
|
79739732-79742103 | protein_coding | ||
|
ENSMUSG00000042535 (Gtpbp1) GTP binding protein 1 |
ENSMUST00000046463 (Gtpbp1-201)
|
79690895-79721478 | protein_coding | |
|
ENSMUSG00000064409 (n-R5s40) nuclear encoded rRNA 5S 40 |
ENSMUST00000082475 (n-R5s40-201)
|
79692502-79692625 | rRNA | |
|
ENSMUSG00000097128 (Gm26884) predicted gene, 26884 |
ENSMUST00000181207 (Gm26884-201)
|
79689140-79692385 | lincRNA | |
Expression Patterns
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