C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: tubulin tyrosine ligase-like family, member 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000100271 TTLL1 9606 - 22:43039644-43089428 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000266254 TTLL1-001 43039644-43089428 protein_coding
  ENST00000331018 TTLL1-201 43039776-43075586 protein_coding
  ENST00000439248 TTLL1-003 43039644-43089338 nonsense_mediated_decay
  ENST00000440761 TTLL1-002 43039669-43089419 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000266254ENST00000331018ENST00000439248ENST00000440761
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000266254 1.546±0.00 1.596±0.00 N/A 3.845±1.30 1.864±1.81 1.297±0.62 1.539±0.96 2.165±0.00 0.413±0.00 1.687±0.00 0.230±0.00 4.116±3.58 2.638±0.16 10.995±0.53
ENST00000331018 1.138±0.00 1.040±0.00 N/A 3.936±0.00 1.714±0.00 0.978±0.59 0.714±0.43 1.824±1.21 N/A 0.492±0.24 0.819±0.56 N/A N/A 7.425±0.00
ENST00000439248 N/A N/A 1.301±0.00 N/A N/A N/A N/A N/A N/A 0.180±0.00 N/A N/A N/A N/A
ENST00000440761 N/A 1.064±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008LG CIL_0008LG_0001 VISTA 22:42800321-43401810
CIL_0004LJ CIL_0004LJ_0001 CGP 22:42835412-43089428
CIL_0008W4 CIL_0008W4_0001 VISTA 22:42938962-43540911
CIL_0004LI CIL_0004LI_0001 CGP 22:43039644-43129712

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003351 IEA epithelial cilium movement
GO:0005515 IEA protein binding
GO:0005737 IEA cytoplasm
GO:0005874 IEA microtubule
GO:0006464 IEA cellular protein modification process
GO:0018095 TAS protein polyglutamylation
GO:0035082 IEA axoneme assembly
GO:0044782 IEA cilium organization
GO:0060271 IEA cilium morphogenesis
GO:0070740 TAS tubulin-glutamic acid ligase activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000090778 ttll1 tubulin tyrosine ligase-like family, member 1 protein_coding Danio_rerio
ENSMUSG00000022442 Ttll1 tubulin tyrosine ligase-like 1 protein_coding Mus_musculus

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