C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tubulin tyrosine ligase-like family, member 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000439248 TTLL1-003 ENSG00000100271 9606 - 22:43039644-43089338 nonsense_mediated_decay

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderLungENST00000439248
Transcript ID Bladder Lung
ENST00000439248 1.301±0.00 0.180±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008LG CIL_0008LG_0001 VISTA 22:42800321-43401810
CIL_0004LJ CIL_0004LJ_0001 CGP 22:42835412-43089428
CIL_0008W4 CIL_0008W4_0001 VISTA 22:42938962-43540911
CIL_0004LI CIL_0004LI_0001 CGP 22:43039644-43129712

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005737 IEA cytoplasm
GO:0005874 IEA microtubule
GO:0018095 TAS protein polyglutamylation
GO:0070740 TAS tubulin-glutamic acid ligase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000109480 Ttll1-002 protein_coding Mus_musculus 0 1068
ENSMUST00000016897 Ttll1-001 protein_coding Mus_musculus 0 1068
ENSMUST00000109479 Ttll1-005 protein_coding Mus_musculus 0 769

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