C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tubulin tyrosine ligase-like family, member 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000266254 TTLL1-001 ENSG00000100271 9606 - 22:43039644-43089428 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000266254
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000266254 1.546±0.00 1.596±0.00 3.845±1.30 1.864±1.81 1.297±0.62 1.539±0.96 2.165±0.00 0.413±0.00 1.687±0.00 0.230±0.00 4.116±3.58 2.638±0.16 10.995±0.53

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008LG CIL_0008LG_0001 VISTA 22:42800321-43401810
CIL_0004LJ CIL_0004LJ_0001 CGP 22:42835412-43089428
CIL_0008W4 CIL_0008W4_0001 VISTA 22:42938962-43540911
CIL_0004LI CIL_0004LI_0001 CGP 22:43039644-43129712

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003351 IEA epithelial cilium movement
GO:0005515 IEA protein binding
GO:0005737 IEA cytoplasm
GO:0005874 IEA microtubule
GO:0006464 IEA cellular protein modification process
GO:0018095 TAS protein polyglutamylation
GO:0035082 IEA axoneme assembly
GO:0044782 IEA cilium organization
GO:0060271 IEA cilium morphogenesis
GO:0070740 TAS tubulin-glutamic acid ligase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000016897 Ttll1-001 protein_coding Mus_musculus 0 1423
ENSMUST00000109480 Ttll1-002 protein_coding Mus_musculus 0 1421
ENSMUST00000109479 Ttll1-005 protein_coding Mus_musculus 0 1123

Loading