C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: apolipoprotein L, 4
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000100336 APOL4 9606 - 22:36189124-36204840 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000328429 APOL4-201 36197456-36204743 protein_coding
  ENST00000332987 APOL4-009 36190797-36204806 protein_coding
  ENST00000352371 APOL4-001 36189129-36204833 protein_coding
  ENST00000397275 APOL4-004 36197455-36204743 protein_coding
  ENST00000419360 APOL4-007 36195326-36204806 protein_coding
  ENST00000436763 APOL4-008 36199335-36204806 protein_coding
  ENST00000449084 APOL4-012 36191259-36204808 processed_transcript
  ENST00000457630 APOL4-006 36191906-36204806 protein_coding
  ENST00000480236 APOL4-011 36201584-36204715 retained_intron
  ENST00000493203 APOL4-010 36191865-36201877 nonsense_mediated_decay
  ENST00000613247 APOL4-003 36189124-36204806 processed_transcript
  ENST00000616056 APOL4-002 36189129-36204840 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000332987ENST00000352371ENST00000449084ENST00000613247ENST00000616056
Transcript ID Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000332987 N/A 0.028±0.00 0.005±0.00 1.320±0.00 0.251±0.00 0.810±0.06 N/A 0.463±0.00 1.408±0.00 0.762±0.00 0.719±0.00 0.866±0.00 N/A
ENST00000352371 N/A N/A N/A N/A N/A N/A 1.733±0.00 N/A N/A N/A N/A N/A 0.424±0.00
ENST00000449084 N/A N/A N/A N/A 0.817±0.00 N/A N/A 1.013±0.00 1.662±0.00 N/A N/A N/A N/A
ENST00000613247 3.742±0.00 N/A 1.416±1.40 2.048±0.00 1.255±1.01 1.985±0.00 0.726±0.43 0.718±0.00 3.304±0.00 0.349±0.27 0.568±0.19 1.165±0.62 0.610±0.28
ENST00000616056 N/A N/A N/A N/A N/A 0.429±0.02 0.743±0.00 0.330±0.00 0.812±0.00 N/A 1.348±1.07 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003GS CIL_0003GS_0002 CGP 22:36140330-36204840
CIL_0003GS CIL_0003GS_0001 CGP 22:36189124-36239954

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0005576 IEA extracellular region
GO:0005615 ISS extracellular space
GO:0006629 NAS lipid metabolic process
GO:0006869 IEA lipid transport
GO:0008289 IEA lipid binding
GO:0042157 IEA lipoprotein metabolic process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000073718 APOL4 apolipoprotein L, 4 protein_coding Danio_rerio
ENSMUSG00000010601 Apol7a apolipoprotein L 7a protein_coding Mus_musculus
ENSMUSG00000044309 Apol7c apolipoprotein L 7c protein_coding Mus_musculus
ENSMUSG00000050014 Apol10b apolipoprotein L 10B protein_coding Mus_musculus
ENSMUSG00000050982 Apol10a apolipoprotein L 10A protein_coding Mus_musculus
ENSMUSG00000056656 Apol8 apolipoprotein L 8 protein_coding Mus_musculus
ENSMUSG00000057346 Apol9a apolipoprotein L 9a protein_coding Mus_musculus
ENSMUSG00000068246 Apol9b apolipoprotein L 9b protein_coding Mus_musculus
ENSMUSG00000068252 Apol7b apolipoprotein L 7b protein_coding Mus_musculus
ENSMUSG00000071716 Apol7e apolipoprotein L 7e protein_coding Mus_musculus
ENSMUSG00000091650 Apol11a apolipoprotein L 11a protein_coding Mus_musculus
ENSMUSG00000091694 Apol11b apolipoprotein L 11b protein_coding Mus_musculus

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