C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: apolipoprotein L 11b
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000091694 Apol11b 10090 - 15:77633951-77643286 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000166623 Apol11b-001 77633951-77643286 protein_coding
  ENSMUST00000180949 Apol11b-002 77633979-77643278 protein_coding
  ENSMUST00000181154 Apol11b-004 77635650-77643270 protein_coding
  ENSMUST00000181467 Apol11b-003 77633951-77643286 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000166623ENSMUST00000180949ENSMUST00000181154ENSMUST00000181467
Transcript ID Adipose Adrenal Bladder Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000166623 N/A 0.048±0.01 N/A N/A N/A 0.771±0.32 N/A 0.753±0.49 0.185±0.00 N/A 0.080±0.02 0.139±0.00 N/A
ENSMUST00000180949 N/A N/A N/A 0.214±0.11 N/A 0.124±0.00 N/A N/A N/A N/A N/A 0.016±0.00 0.025±0.00
ENSMUST00000181154 N/A N/A N/A N/A 0.138±0.01 N/A N/A N/A N/A N/A N/A N/A 0.118±0.05
ENSMUST00000181467 0.043±0.02 0.025±0.01 0.037±0.02 0.333±0.04 0.067±0.02 1.844±1.32 0.097±0.06 1.477±1.26 0.668±0.46 0.078±0.05 0.111±0.03 0.060±0.03 0.028±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003GS CIL_0003GS_0005 CGP 15:77584158-77643286
CIL_0003GS CIL_0003GS_000C CGP 15:77633951-77719288

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0005576 IEA extracellular region
GO:0006869 IEA lipid transport
GO:0008150 ND biological_process
GO:0008289 IEA lipid binding
GO:0042157 IEA lipoprotein metabolic process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000073718 APOL4 apolipoprotein L, 4 protein_coding Danio_rerio
ENSG00000100336 APOL4 apolipoprotein L, 4 protein_coding Homo_sapiens
ENSG00000100342 APOL1 apolipoprotein L, 1 protein_coding Homo_sapiens
ENSG00000128284 APOL3 apolipoprotein L, 3 protein_coding Homo_sapiens
ENSG00000128335 APOL2 apolipoprotein L, 2 protein_coding Homo_sapiens

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