C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: apolipoprotein L 9a
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000057346 Apol9a 10090 - 15:77403789-77411080 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000081776 Apol9a-201 77403789-77411080 protein_coding
  ENSMUST00000089452 Apol9a-202 77403789-77411034 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000081776ENSMUST00000089452
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000081776 1.983±0.99 0.847±0.25 0.856±0.11 0.158±0.09 0.565±0.27 2.572±0.67 0.228±0.14 0.545±0.09 13.445±12.70 0.541±0.23 0.050±0.02 1.881±0.71 0.623±0.50 0.071±0.01
ENSMUST00000089452 0.128±0.00 0.170±0.04 0.199±0.03 N/A 0.162±0.06 0.269±0.00 0.364±0.00 0.149±0.00 3.804±2.33 N/A N/A 0.666±0.41 0.118±0.05 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003GS CIL_0003GS_0004 CGP 15:77388221-77411080
CIL_0003GS CIL_0003GS_0007 CGP 15:77403789-77447492

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0005576 IEA extracellular region
GO:0006869 IEA lipid transport
GO:0008150 ND biological_process
GO:0008289 IEA lipid binding
GO:0042157 IEA lipoprotein metabolic process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000073718 APOL4 apolipoprotein L, 4 protein_coding Danio_rerio
ENSG00000100336 APOL4 apolipoprotein L, 4 protein_coding Homo_sapiens
ENSG00000100342 APOL1 apolipoprotein L, 1 protein_coding Homo_sapiens
ENSG00000128284 APOL3 apolipoprotein L, 3 protein_coding Homo_sapiens
ENSG00000128335 APOL2 apolipoprotein L, 2 protein_coding Homo_sapiens

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