C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: apolipoprotein L 7a
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000010601 Apol7a 10090 - 15:77388221-77399110 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000010745 Apol7a-201 77388957-77396458 protein_coding
  ENSMUST00000175789 Apol7a-003 77393415-77398451 protein_coding
  ENSMUST00000175919 Apol7a-002 77388222-77399086 protein_coding
  ENSMUST00000176074 Apol7a-001 77388221-77399110 protein_coding
  ENSMUST00000177135 Apol7a-004 77393333-77396934 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000010745ENSMUST00000175919ENSMUST00000176074ENSMUST00000177135
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000010745 N/A N/A N/A N/A N/A N/A 0.182±0.00 N/A 0.041±0.00 N/A 0.024±0.00 0.480±0.28 0.165±0.06 0.090±0.00
ENSMUST00000175919 0.253±0.18 0.101±0.00 0.606±0.08 0.095±0.00 0.146±0.10 5.130±2.39 0.083±0.02 0.020±0.01 13.438±12.66 0.175±0.03 0.033±0.00 0.535±0.31 0.845±0.93 0.055±0.02
ENSMUST00000176074 N/A 0.128±0.00 N/A 0.041±0.00 0.130±0.07 0.562±0.21 N/A N/A 15.573±13.11 0.103±0.02 N/A 0.191±0.06 N/A N/A
ENSMUST00000177135 0.094±0.05 N/A N/A N/A 0.130±0.00 N/A 0.039±0.00 N/A N/A N/A N/A N/A N/A 0.047±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008TT CIL_0008TT_0002 VISTA 15:76789079-77390092
CIL_0001VM CIL_0001VM_0002 CGP 15:77078990-77399110
CIL_0003GS CIL_0003GS_0004 CGP 15:77388221-77411080

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005575 ND cellular_component
GO:0005576 IEA extracellular region
GO:0006869 IEA lipid transport
GO:0008289 IEA lipid binding
GO:0042157 IEA lipoprotein metabolic process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000073718 APOL4 apolipoprotein L, 4 protein_coding Danio_rerio
ENSG00000100336 APOL4 apolipoprotein L, 4 protein_coding Homo_sapiens
ENSG00000100342 APOL1 apolipoprotein L, 1 protein_coding Homo_sapiens
ENSG00000128284 APOL3 apolipoprotein L, 3 protein_coding Homo_sapiens
ENSG00000128335 APOL2 apolipoprotein L, 2 protein_coding Homo_sapiens

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