C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: calcium channel, voltage-dependent, T type, alpha 1I subunit
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000100346 CACNA1I 9606 + 22:39570753-39689737 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000401624 CACNA1I-003 39570753-39685211 protein_coding
  ENST00000402142 CACNA1I-001 39570753-39689737 protein_coding
  ENST00000404898 CACNA1I-002 39570753-39689730 protein_coding
  ENST00000407673 CACNA1I-004 39570753-39684528 protein_coding
  ENST00000471970 CACNA1I-005 39642797-39643512 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000401624ENST00000402142ENST00000404898ENST00000407673
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000401624 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.077±0.00
ENST00000402142 N/A N/A 0.993±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.312±0.00
ENST00000404898 0.025±0.00 0.811±0.00 2.673±0.00 0.017±0.00 0.035±0.01 0.005±0.00 0.025±0.00 0.024±0.01 0.110±0.08 N/A 0.052±0.02 0.007±0.00 0.170±0.00
ENST00000407673 N/A N/A N/A N/A 0.037±0.00 0.007±0.00 0.055±0.00 N/A 0.009±0.00 0.155±0.00 N/A 0.028±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005W8 CIL_0005W8_0001 CGP 22:39529093-39689737
CIL_0005W5 CIL_0005W5_0001 CGP 22:39570753-39893864

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005216 IEA ion channel activity
GO:0005245 IBA voltage-gated calcium channel activity
GO:0005515 IPI protein binding
GO:0005886 IBA plasma membrane
GO:0005891 IEA voltage-gated calcium channel complex
GO:0006810 TAS transport
GO:0006811 IEA ion transport
GO:0007165 TAS signal transduction
GO:0007411 TAS axon guidance
GO:0016020 IEA membrane
GO:0019228 IEA neuronal action potential
GO:0030431 IEA sleep
GO:0034765 IEA regulation of ion transmembrane transport
GO:0055085 IEA transmembrane transport
GO:0070509 IBA calcium ion import
GO:0070588 IEA calcium ion transmembrane transport
GO:0086010 IBA membrane depolarization during action potential

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000070522 cacna1i calcium channel, voltage-dependent, T type, alpha 1I subunit protein_coding Danio_rerio
ENSMUSG00000022416 Cacna1i calcium channel, voltage-dependent, alpha 1I subunit protein_coding Mus_musculus

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