C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005W5_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000100346-ENSG00000176177 CGP 9606 22:39570753-39893864
GeneTranscriptPositionBiotype
ENSG00000100346 (CACNA1I)
calcium channel, voltage-dependent, T type, alpha 1I subunit 		ENST00000401624 (CACNA1I-003) 39570753-39685211 protein_coding
ENST00000402142 (CACNA1I-001) 39570753-39689737 protein_coding
ENST00000404898 (CACNA1I-002) 39570753-39689730 protein_coding
ENST00000407673 (CACNA1I-004) 39570753-39684528 protein_coding
ENST00000471970 (CACNA1I-005) 39642797-39643512 processed_transcript
ENSG00000176177 (ENTHD1)
ENTH domain containing 1 		ENST00000325157 (ENTHD1-001) 39743044-39893790 protein_coding
ENST00000490326 (ENTHD1-002) 39893215-39893864 processed_transcript
ENSG00000226085 (UQCRFS1P1)
ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1 pseudogene 1 		ENST00000435169 (UQCRFS1P1-001) 39875289-39876108 processed_pseudogene
ENSG00000235647 (RP1-172B20.6)
 ENST00000458183 (RP1-172B20.6-001) 39750127-39751293 processed_pseudogene
ENSG00000238875 (RN7SKP210)
RNA, 7SK small nuclear pseudogene 210 		ENST00000459176 (RN7SKP210-201) 39874255-39874515 misc_RNA
CIL_0005W5_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000022416-ENSMUSG00000050439 CGP 10090 15:80287238-80560470
GeneTranscriptPositionBiotype
ENSMUSG00000022416 (Cacna1i)
calcium channel, voltage-dependent, alpha 1I subunit 		ENSMUST00000160175 (Cacna1i-003) 80389328-80393820 protein_coding
ENSMUST00000160424 (Cacna1i-001) 80287238-80398279 protein_coding
ENSMUST00000161863 (Cacna1i-004) 80389328-80390917 protein_coding
ENSMUST00000162025 (Cacna1i-005) 80389328-80390917 protein_coding
ENSMUST00000162155 (Cacna1i-002) 80287534-80395747 nonsense_mediated_decay
ENSMUST00000162913 (Cacna1i-006) 80389328-80390917 nonsense_mediated_decay
ENSMUSG00000050439 (Enthd1)
ENTH domain containing 1 		ENSMUST00000096347 (Enthd1-201) 80452240-80560470 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005W5_0001ENSG00000100346ENST00000401624ENST00000402142ENST00000404898ENST00000407673ENST00000471970ENSG00000176177ENST00000325157ENST00000490326ENSG00000226085ENST00000435169ENSG00000235647ENST00000458183ENSG00000238875ENST00000459176CIL_0005W5_0002ENSMUSG00000022416ENSMUST00000160175ENSMUST00000160424ENSMUST00000161863ENSMUST00000162025ENSMUST00000162155ENSMUST00000162913ENSMUSG00000050439ENSMUST00000096347
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005W5_0001ENSG00000100346ENST00000401624ENST00000402142ENST00000404898ENST00000407673ENSG00000176177ENST00000325157ENSG00000226085ENST00000435169ENSG00000235647ENST00000458183ENSG00000238875ENST00000459176CIL_0005W5_0002ENSMUSG00000022416ENSMUST00000160175ENSMUST00000160424ENSMUST00000161863ENSMUST00000162025ENSMUST00000162155ENSMUST00000162913ENSMUSG00000050439ENSMUST00000096347
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000100346 ENST00000401624 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.077±0.00
ENST00000402142 N/A N/A N/A 0.993±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.312±0.00
ENST00000404898 0.025±0.00 0.811±0.00 N/A 2.673±0.00 0.017±0.00 0.035±0.01 0.005±0.00 0.025±0.00 0.024±0.01 0.110±0.08 N/A 0.052±0.02 0.007±0.00 0.170±0.00
ENST00000407673 N/A N/A N/A N/A N/A 0.037±0.00 0.007±0.00 0.055±0.00 N/A 0.009±0.00 0.155±0.00 N/A 0.028±0.00 N/A
ENST00000471970 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000176177 ENST00000325157 0.004±0.00 0.049±0.00 N/A N/A 0.055±0.00 0.004±0.00 N/A N/A N/A 0.055±0.00 N/A 0.008±0.00 N/A 3.476±0.18
ENST00000490326 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000226085 ENST00000435169 0.871±0.00 N/A N/A 0.255±0.13 N/A 0.573±0.00 1.409±0.00 1.289±0.00 0.731±0.00 0.340±0.00 0.849±0.00 0.202±0.00 0.161±0.00 N/A
ENSG00000235647 ENST00000458183 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.094±0.06
ENSG00000238875 ENST00000459176 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.191±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000022416 ENSMUST00000160175 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.083±0.01 0.170±0.00 N/A N/A
ENSMUST00000160424 0.018±0.01 0.040±0.01 0.006±0.00 0.705±0.05 0.878±0.00 N/A 0.043±0.03 0.042±0.01 0.010±0.01 N/A 0.038±0.02 0.050±0.03 0.026±0.02 0.145±0.00
ENSMUST00000161863 0.107±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000162025 N/A N/A N/A N/A N/A N/A N/A N/A 0.527±0.00 N/A N/A N/A N/A N/A
ENSMUST00000162155 0.003±0.00 0.248±0.05 N/A 0.482±0.00 1.322±0.93 0.190±0.01 N/A 0.045±0.03 0.008±0.01 0.060±0.00 N/A 0.060±0.02 0.013±0.00 N/A
ENSMUST00000162913 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.944±0.00 N/A
ENSMUSG00000050439 ENSMUST00000096347 0.017±0.01 N/A 0.007±0.00 0.015±0.00 0.063±0.04 N/A N/A 0.019±0.01 0.002±0.00 0.030±0.00 N/A 0.069±0.03 0.016±0.00 4.493±3.61

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