C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005W8_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000187051-ENSG00000100346 CGP 9606 22:39529093-39689737
GeneTranscriptPositionBiotype
ENSG00000100346 (CACNA1I)
calcium channel, voltage-dependent, T type, alpha 1I subunit 		ENST00000401624 (CACNA1I-003) 39570753-39685211 protein_coding
ENST00000402142 (CACNA1I-001) 39570753-39689737 protein_coding
ENST00000404898 (CACNA1I-002) 39570753-39689730 protein_coding
ENST00000407673 (CACNA1I-004) 39570753-39684528 protein_coding
ENST00000471970 (CACNA1I-005) 39642797-39643512 processed_transcript
ENSG00000187051 (RPS19BP1)
ribosomal protein S19 binding protein 1 		ENST00000334678 (RPS19BP1-001) 39529093-39532855 protein_coding
ENST00000420879 (RPS19BP1-006) 39529156-39532761 nonsense_mediated_decay
ENST00000459956 (RPS19BP1-004) 39529214-39532738 retained_intron
ENST00000472291 (RPS19BP1-003) 39531729-39532760 retained_intron
ENST00000488602 (RPS19BP1-002) 39529097-39532093 retained_intron
ENST00000491966 (RPS19BP1-005) 39529446-39532732 retained_intron

Homo sapiens Ensembl (GRCh38)

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CIL_0005W8_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000051518-ENSMUSG00000022416 CGP 10090 15:80260614-80398279
GeneTranscriptPositionBiotype
ENSMUSG00000022416 (Cacna1i)
calcium channel, voltage-dependent, alpha 1I subunit 		ENSMUST00000160175 (Cacna1i-003) 80389328-80393820 protein_coding
ENSMUST00000160424 (Cacna1i-001) 80287238-80398279 protein_coding
ENSMUST00000161863 (Cacna1i-004) 80389328-80390917 protein_coding
ENSMUST00000162025 (Cacna1i-005) 80389328-80390917 protein_coding
ENSMUST00000162155 (Cacna1i-002) 80287534-80395747 nonsense_mediated_decay
ENSMUST00000162913 (Cacna1i-006) 80389328-80390917 nonsense_mediated_decay
ENSMUSG00000051518 (Rps19bp1)
ribosomal protein S19 binding protein 1 		ENSMUST00000052499 (Rps19bp1-201) 80260614-80264306 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005W8_0001ENSG00000100346ENST00000401624ENST00000402142ENST00000404898ENST00000407673ENST00000471970ENSG00000187051ENST00000334678ENST00000420879ENST00000459956ENST00000472291ENST00000488602ENST00000491966CIL_0005W8_0002ENSMUSG00000022416ENSMUST00000160175ENSMUST00000160424ENSMUST00000161863ENSMUST00000162025ENSMUST00000162155ENSMUST00000162913ENSMUSG00000051518ENSMUST00000052499
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005W8_0001ENSG00000100346ENST00000401624ENST00000402142ENST00000404898ENST00000407673ENSG00000187051ENST00000334678ENST00000459956ENST00000488602ENST00000491966CIL_0005W8_0002ENSMUSG00000022416ENSMUST00000160175ENSMUST00000160424ENSMUST00000161863ENSMUST00000162025ENSMUST00000162155ENSMUST00000162913ENSMUSG00000051518ENSMUST00000052499
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000100346 ENST00000401624 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.077±0.00
ENST00000402142 N/A N/A N/A 0.993±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.312±0.00
ENST00000404898 0.025±0.00 0.811±0.00 N/A 2.673±0.00 0.017±0.00 0.035±0.01 0.005±0.00 0.025±0.00 0.024±0.01 0.110±0.08 N/A 0.052±0.02 0.007±0.00 0.170±0.00
ENST00000407673 N/A N/A N/A N/A N/A 0.037±0.00 0.007±0.00 0.055±0.00 N/A 0.009±0.00 0.155±0.00 N/A 0.028±0.00 N/A
ENST00000471970 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000187051 ENST00000334678 33.180±0.00 57.402±0.00 1.561±0.00 27.853±9.15 18.861±13.75 42.215±38.19 19.280±16.81 52.062±41.81 30.507±26.76 37.940±34.37 21.431±13.03 64.449±53.46 77.000±7.17 77.747±11.15
ENST00000420879 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000459956 N/A 15.379±0.00 N/A 6.961±0.00 17.207±0.00 1.817±0.00 N/A N/A N/A N/A N/A 5.640±0.00 N/A N/A
ENST00000472291 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000488602 N/A N/A 0.235±0.00 N/A N/A 0.224±0.00 N/A N/A 0.455±0.00 0.432±0.00 N/A N/A N/A N/A
ENST00000491966 N/A N/A 0.667±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000022416 ENSMUST00000160175 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.083±0.01 0.170±0.00 N/A N/A
ENSMUST00000160424 0.018±0.01 0.040±0.01 0.006±0.00 0.705±0.05 0.878±0.00 N/A 0.043±0.03 0.042±0.01 0.010±0.01 N/A 0.038±0.02 0.050±0.03 0.026±0.02 0.145±0.00
ENSMUST00000161863 0.107±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000162025 N/A N/A N/A N/A N/A N/A N/A N/A 0.527±0.00 N/A N/A N/A N/A N/A
ENSMUST00000162155 0.003±0.00 0.248±0.05 N/A 0.482±0.00 1.322±0.93 0.190±0.01 N/A 0.045±0.03 0.008±0.01 0.060±0.00 N/A 0.060±0.02 0.013±0.00 N/A
ENSMUST00000162913 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.944±0.00 N/A
ENSMUSG00000051518 ENSMUST00000052499 13.425±2.34 17.589±2.74 12.723±1.71 20.963±4.52 12.570±3.91 12.344±2.40 5.673±1.14 13.788±1.85 14.712±5.92 8.056±1.33 5.346±0.68 18.845±14.64 39.113±30.48 8.292±1.32

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