C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: calcium channel, voltage-dependent, alpha 1I subunit
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000022416 Cacna1i 10090 + 15:80287238-80398279 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000160175 Cacna1i-003 80389328-80393820 protein_coding
  ENSMUST00000160424 Cacna1i-001 80287238-80398279 protein_coding
  ENSMUST00000161863 Cacna1i-004 80389328-80390917 protein_coding
  ENSMUST00000162025 Cacna1i-005 80389328-80390917 protein_coding
  ENSMUST00000162155 Cacna1i-002 80287534-80395747 nonsense_mediated_decay
  ENSMUST00000162913 Cacna1i-006 80389328-80390917 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000160175ENSMUST00000160424ENSMUST00000161863ENSMUST00000162025ENSMUST00000162155ENSMUST00000162913
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000160175 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.083±0.01 0.170±0.00 N/A N/A
ENSMUST00000160424 0.018±0.01 0.040±0.01 0.006±0.00 0.705±0.05 0.878±0.00 N/A 0.043±0.03 0.042±0.01 0.010±0.01 N/A 0.038±0.02 0.050±0.03 0.026±0.02 0.145±0.00
ENSMUST00000161863 0.107±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000162025 N/A N/A N/A N/A N/A N/A N/A N/A 0.527±0.00 N/A N/A N/A N/A N/A
ENSMUST00000162155 0.003±0.00 0.248±0.05 N/A 0.482±0.00 1.322±0.93 0.190±0.01 N/A 0.045±0.03 0.008±0.01 0.060±0.00 N/A 0.060±0.02 0.013±0.00 N/A
ENSMUST00000162913 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.944±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005W8 CIL_0005W8_0002 CGP 15:80260614-80398279
CIL_0005W5 CIL_0005W5_0002 CGP 15:80287238-80560470

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005245 IBA voltage-gated calcium channel activity
GO:0005515 IEA protein binding
GO:0005886 IBA plasma membrane
GO:0005891 IEA voltage-gated calcium channel complex
GO:0019228 IMP neuronal action potential
GO:0030431 IMP sleep
GO:0034765 IEA regulation of ion transmembrane transport
GO:0070509 IBA calcium ion import
GO:0070588 IEA calcium ion transmembrane transport
GO:0086010 IBA membrane depolarization during action potential

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000070522 cacna1i calcium channel, voltage-dependent, T type, alpha 1I subunit protein_coding Danio_rerio
ENSG00000100346 CACNA1I calcium channel, voltage-dependent, T type, alpha 1I subunit protein_coding Homo_sapiens

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