C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: potassium channel tetramerization domain containing 17
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000610767 KCTD17-201 ENSG00000100379 9606 + 22:37051736-37063389 protein_coding

Homo sapiens EnsemblGRCh38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartMuscleOvaryENST00000610767
Transcript ID Adipose Bladder Brain Breast Colon Heart Muscle Ovary
ENST00000610767 1.636±0.00 0.129±0.00 7.182±5.02 1.372±0.00 3.919±3.34 0.477±0.00 0.995±0.00 4.480±1.27

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00036R CIL_00036R_0001 CGP 22:37019635-37063390
CIL_00036O CIL_00036O_0001 CGP 22:37051736-37109563

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0051260 IEA protein homooligomerization

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000159771 Kctd17-004 protein_coding Mus_musculus 0 1024
ENSMUST00000162517 Kctd17-003 protein_coding Mus_musculus 0 850
ENSMUST00000089414 Kctd17-001 protein_coding Mus_musculus 0 848
ENSMUST00000166142 Kctd17-002 protein_coding Mus_musculus 0 848
ENSMUST00000161016 Kctd17-007 retained_intron Mus_musculus 0 793
ENSMUST00000162321 Kctd17-005 nonsense_mediated_decay Mus_musculus 0 638
ENSMUST00000162808 Kctd17-009 protein_coding Mus_musculus 0 462
ENSMUST00000160916 Kctd17-008 retained_intron Mus_musculus 0 372
ENSMUST00000017090 Kctd5-001 protein_coding Mus_musculus 0 246
ENSMUST00000162605 Kctd17-006 retained_intron Mus_musculus 0 200
ENSMUST00000127755 Kctd5-002 processed_transcript Mus_musculus 1e-28 132

Loading