C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: potassium channel tetramerization domain containing 17
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000402077 KCTD17-001 ENSG00000100379 9606 + 22:37051739-37063390 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonKidneyLiverLungOvaryPlacentaTestisENST00000402077
Transcript ID Adipose Adrenal Breast Colon Kidney Liver Lung Ovary Placenta Testis
ENST00000402077 4.369±0.00 8.632±0.00 1.907±0.00 2.683±0.00 2.895±0.00 0.353±0.05 1.005±0.83 4.927±4.30 1.931±0.00 13.337±8.92

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00036R CIL_00036R_0001 CGP 22:37019635-37063390
CIL_00036O CIL_00036O_0001 CGP 22:37051736-37109563

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI:IEA protein binding
GO:0042802 IPI identical protein binding
GO:0051260 IEA protein homooligomerization

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000089414 Kctd17-001 protein_coding Mus_musculus 0 957
ENSMUST00000162517 Kctd17-003 protein_coding Mus_musculus 0 845
ENSMUST00000166142 Kctd17-002 protein_coding Mus_musculus 0 845
ENSMUST00000159771 Kctd17-004 protein_coding Mus_musculus 0 835
ENSMUST00000162808 Kctd17-009 protein_coding Mus_musculus 0 819
ENSMUST00000161016 Kctd17-007 retained_intron Mus_musculus 0 793
ENSMUST00000162321 Kctd17-005 nonsense_mediated_decay Mus_musculus 0 754
ENSMUST00000160916 Kctd17-008 retained_intron Mus_musculus 0 488
ENSMUST00000162605 Kctd17-006 retained_intron Mus_musculus 0 313
ENSMUST00000017090 Kctd5-001 protein_coding Mus_musculus 0 246
ENSMUST00000127755 Kctd5-002 processed_transcript Mus_musculus 1e-28 132

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