C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: potassium channel tetramerization domain containing 17
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000462640 KCTD17-006 ENSG00000100379 9606 + 22:37057398-37061408 retained_intron

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalColonHeartKidneyLiverLungTestisENST00000462640
Transcript ID Adipose Adrenal Colon Heart Kidney Liver Lung Testis
ENST00000462640 2.587±0.00 6.217±0.00 6.933±0.00 1.377±0.00 0.627±0.31 1.152±0.00 4.032±0.00 9.585±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00036R CIL_00036R_0001 CGP 22:37019635-37063390
CIL_00036O CIL_00036O_0001 CGP 22:37051736-37109563

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000160916 Kctd17-008 retained_intron Mus_musculus 0 880
ENSMUST00000162321 Kctd17-005 nonsense_mediated_decay Mus_musculus 0 457
ENSMUST00000162808 Kctd17-009 protein_coding Mus_musculus 0 388
ENSMUST00000089414 Kctd17-001 protein_coding Mus_musculus 0 385
ENSMUST00000162605 Kctd17-006 retained_intron Mus_musculus 0 381
ENSMUST00000161016 Kctd17-007 retained_intron Mus_musculus 0 272
ENSMUST00000159771 Kctd17-004 protein_coding Mus_musculus 0 272
ENSMUST00000162517 Kctd17-003 protein_coding Mus_musculus 0 272
ENSMUST00000166142 Kctd17-002 protein_coding Mus_musculus 0 272
ENSMUST00000017090 Kctd5-001 protein_coding Mus_musculus 6.02558e-44 182
ENSMUST00000127755 Kctd5-002 processed_transcript Mus_musculus 6e-29 132

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