C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: GINS complex subunit 1 (Psf1 homolog)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000101003 GINS1 9606 + 20:25407727-25452628 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000262460 GINS1-001 25407727-25448555 protein_coding
  ENST00000473460 GINS1-004 25413457-25417246 processed_transcript
  ENST00000481735 GINS1-002 25443024-25452628 processed_transcript
  ENST00000484893 GINS1-003 25407731-25418195 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000262460ENST00000473460ENST00000481735
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000262460 0.186±0.00 0.273±0.00 0.481±0.19 1.253±0.57 0.643±0.58 0.220±0.00 0.415±0.03 0.294±0.16 0.257±0.10 0.099±0.00 4.034±2.54 1.237±0.40 3.380±0.30
ENST00000473460 N/A N/A 1.189±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000481735 N/A N/A N/A N/A N/A N/A 3.058±0.00 N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002A2 CIL_0002A2_0001 CGP 20:25294743-25452628
CIL_0000XS CIL_0000XS_0001 CGP 20:25407727-25585517

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000278 TAS mitotic cell cycle
GO:0001833 IEA inner cell mass cell proliferation
GO:0005515 IEA protein binding
GO:0005634 IDA nucleus
GO:0005654 TAS nucleoplasm
GO:0005737 IDA cytoplasm
GO:0006260 IEA DNA replication
GO:0006271 TAS DNA strand elongation involved in DNA replication

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000007624 gins1 GINS complex subunit 1 (Psf1 homolog) protein_coding Danio_rerio
ENSMUSG00000027454 Gins1 GINS complex subunit 1 (Psf1 homolog) protein_coding Mus_musculus

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