C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: GINS complex subunit 1 (Psf1 homolog)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000262460 GINS1-001 ENSG00000101003 9606 + 20:25407727-25448555 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000262460
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000262460 0.186±0.00 0.273±0.00 0.481±0.19 1.253±0.57 0.643±0.58 0.220±0.00 0.415±0.03 0.294±0.16 0.257±0.10 0.099±0.00 4.034±2.54 1.237±0.40 3.380±0.30

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002A2 CIL_0002A2_0001 CGP 20:25294743-25452628
CIL_0000XS CIL_0000XS_0001 CGP 20:25407727-25585517

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000278 TAS mitotic cell cycle
GO:0001833 IEA inner cell mass cell proliferation
GO:0005515 IEA protein binding
GO:0005634 IDA nucleus
GO:0005654 TAS nucleoplasm
GO:0005737 IDA cytoplasm
GO:0006260 IEA DNA replication
GO:0006271 TAS DNA strand elongation involved in DNA replication

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000028948 Gins1-001 protein_coding Mus_musculus 0 728
ENSMUST00000140950 Gins1-002 processed_transcript Mus_musculus 0 558
ENSMUST00000123217 Gins1-004 processed_transcript Mus_musculus 0 407
ENSMUST00000152991 Gins1-003 processed_transcript Mus_musculus 0 357

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