C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: GINS complex subunit 1 (Psf1 homolog)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000027454 Gins1 10090 + 2:150905400-150931280 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000028948 Gins1-001 150909594-150931280 protein_coding
  ENSMUST00000123217 Gins1-004 150912819-150927545 processed_transcript
  ENSMUST00000140950 Gins1-002 150909617-150926097 processed_transcript
  ENSMUST00000152991 Gins1-003 150905400-150925903 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000028948ENSMUST00000123217ENSMUST00000140950ENSMUST00000152991
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000028948 0.980±0.30 0.812±0.27 1.497±0.61 5.980±4.50 0.794±0.40 0.888±0.40 0.824±0.15 0.411±0.16 12.140±12.78 0.365±0.12 0.876±0.21 2.157±0.96 7.583±4.98 6.533±2.22
ENSMUST00000123217 N/A N/A N/A N/A 0.219±0.00 N/A N/A 0.196±0.00 N/A N/A N/A 0.357±0.00 N/A N/A
ENSMUST00000140950 0.194±0.00 N/A N/A N/A 0.371±0.00 N/A N/A 0.134±0.00 N/A N/A N/A 0.903±0.00 N/A N/A
ENSMUST00000152991 N/A 0.460±0.00 N/A 1.413±0.00 N/A 0.822±0.00 0.995±0.00 N/A N/A N/A N/A N/A N/A 3.714±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002A2 CIL_0002A2_0002 CGP 2:150832493-150931280
CIL_0000XS CIL_0000XS_0002 CGP 2:150905400-151039382

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001833 IMP inner cell mass cell proliferation
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0006260 IMP DNA replication

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000007624 gins1 GINS complex subunit 1 (Psf1 homolog) protein_coding Danio_rerio
ENSG00000101003 GINS1 GINS complex subunit 1 (Psf1 homolog) protein_coding Homo_sapiens

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