C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: fermitin family member 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000101311 FERMT1 9606 - 20:6074845-6123544 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000217289 FERMT1-001 6074845-6123544 protein_coding
  ENST00000378844 FERMT1-004 6112569-6120492 protein_coding
  ENST00000478194 FERMT1-002 6074845-6094172 processed_transcript
  ENST00000536936 FERMT1-201 6076022-6123030 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000217289ENST00000378844ENST00000478194ENST00000536936
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000217289 0.093±0.00 N/A 0.080±0.00 0.037±0.00 1.839±0.00 1.466±0.00 0.046±0.00 N/A N/A N/A N/A 4.718±3.57 0.799±0.32 N/A
ENST00000378844 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.243±0.00
ENST00000478194 N/A 0.062±0.00 N/A N/A N/A 1.258±0.00 N/A 0.127±0.04 0.056±0.00 0.269±0.01 0.040±0.00 2.401±2.06 0.811±0.00 0.261±0.12
ENST00000536936 N/A N/A 0.177±0.00 0.158±0.09 2.170±0.00 N/A 0.025±0.00 N/A N/A N/A N/A 4.550±0.00 1.479±0.00 0.022±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001IC CIL_0001IC_0001 CGP 20:6040778-6123544
CIL_0001J1 CIL_0001J1_0001 CGP 20:6074845-6780280

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005829 IDA cytosol
GO:0005886 IEA plasma membrane
GO:0005925 IEA focal adhesion
GO:0007155 IDA cell adhesion
GO:0030054 IDA cell junction
GO:0031941 IEA filamentous actin
GO:0042995 IEA cell projection
GO:0043616 IDA keratinocyte proliferation
GO:0051546 IDA keratinocyte migration
GO:0090162 IDA establishment of epithelial cell polarity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000052652 fermt1 fermitin family member 1 protein_coding Danio_rerio
ENSMUSG00000027356 Fermt1 fermitin family homolog 1 (Drosophila) protein_coding Mus_musculus

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