C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001IC_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000125872-ENSG00000101311 CGP 9606 20:6040778-6123544
GeneTranscriptPositionBiotype
ENSG00000101311 (FERMT1)
fermitin family member 1 		ENST00000217289 (FERMT1-001) 6074845-6123544 protein_coding
ENST00000378844 (FERMT1-004) 6112569-6120492 protein_coding
ENST00000478194 (FERMT1-002) 6074845-6094172 processed_transcript
ENST00000536936 (FERMT1-201) 6076022-6123030 protein_coding
ENSG00000125872 (LRRN4)
leucine rich repeat neuronal 4 		ENST00000378858 (LRRN4-001) 6040778-6054049 protein_coding
ENSG00000278192 (RP5-1056H1.2)
 ENST00000619370 (RP5-1056H1.2-001) 6065966-6067897 lincRNA
CIL_0001IC_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000043110-ENSMUSG00000027356 CGP 10090 2:132868305-132945906
GeneTranscriptPositionBiotype
ENSMUSG00000027356 (Fermt1)
fermitin family homolog 1 (Drosophila) 		ENSMUST00000038280 (Fermt1-001) 132904389-132945906 protein_coding
ENSMUST00000134937 (Fermt1-002) 132904389-132945629 retained_intron
ENSMUST00000143981 (Fermt1-004) 132939096-132941963 processed_transcript
ENSMUST00000144342 (Fermt1-003) 132936113-132942097 processed_transcript
ENSMUSG00000043110 (Lrrn4)
leucine rich repeat neuronal 4 		ENSMUST00000049787 (Lrrn4-001) 132868305-132880891 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001IC_0001ENSG00000101311ENST00000217289ENST00000378844ENST00000478194ENST00000536936ENSG00000125872ENST00000378858ENSG00000278192ENST00000619370CIL_0001IC_0002ENSMUSG00000027356ENSMUST00000038280ENSMUST00000134937ENSMUST00000143981ENSMUST00000144342ENSMUSG00000043110ENSMUST00000049787
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001IC_0001ENSG00000101311ENST00000217289ENST00000378844ENST00000478194ENST00000536936ENSG00000125872ENST00000378858ENSG00000278192ENST00000619370CIL_0001IC_0002ENSMUSG00000027356ENSMUST00000038280ENSMUST00000134937ENSMUST00000143981ENSMUST00000144342ENSMUSG00000043110ENSMUST00000049787
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000101311 ENST00000217289 0.093±0.00 N/A 0.080±0.00 0.037±0.00 1.839±0.00 1.466±0.00 0.046±0.00 N/A N/A N/A N/A 4.718±3.57 0.799±0.32 N/A
ENST00000378844 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.243±0.00
ENST00000478194 N/A 0.062±0.00 N/A N/A N/A 1.258±0.00 N/A 0.127±0.04 0.056±0.00 0.269±0.01 0.040±0.00 2.401±2.06 0.811±0.00 0.261±0.12
ENST00000536936 N/A N/A 0.177±0.00 0.158±0.09 2.170±0.00 N/A 0.025±0.00 N/A N/A N/A N/A 4.550±0.00 1.479±0.00 0.022±0.00
ENSG00000125872 ENST00000378858 N/A 0.060±0.00 0.119±0.00 0.015±0.00 0.108±0.00 0.540±0.00 0.061±0.00 N/A 0.089±0.00 18.627±16.44 N/A 0.450±0.55 0.111±0.00 0.746±0.72
ENSG00000278192 ENST00000619370 0.029±0.00 0.110±0.00 N/A 0.306±0.22 0.313±0.23 0.392±0.08 0.026±0.00 0.290±0.00 0.058±0.03 0.014±0.00 N/A 0.822±0.75 0.108±0.10 0.124±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000027356 ENSMUST00000038280 2.572±2.56 N/A 1.546±0.28 0.098±0.04 1.130±0.05 15.308±2.96 0.009±0.00 6.247±0.99 0.090±0.11 0.337±0.09 0.015±0.01 1.929±0.56 0.215±0.11 0.047±0.02
ENSMUST00000134937 0.632±0.00 0.039±0.02 0.632±0.12 N/A 0.527±0.00 N/A N/A N/A 0.061±0.08 0.314±0.00 N/A 1.210±0.73 0.061±0.01 0.013±0.01
ENSMUST00000143981 0.111±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000144342 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.246±0.00 0.426±0.00
ENSMUSG00000043110 ENSMUST00000049787 7.353±4.68 2.157±1.00 1.623±0.00 0.049±0.03 N/A 1.670±0.51 3.405±0.76 0.304±0.10 0.445±0.12 13.559±7.07 0.012±0.00 10.684±5.34 2.969±1.34 1.035±0.70

Loading