C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: fermitin family homolog 1 (Drosophila)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000027356 Fermt1 10090 - 2:132904389-132945906 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000038280 Fermt1-001 132904389-132945906 protein_coding
  ENSMUST00000134937 Fermt1-002 132904389-132945629 retained_intron
  ENSMUST00000143981 Fermt1-004 132939096-132941963 processed_transcript
  ENSMUST00000144342 Fermt1-003 132936113-132942097 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000038280ENSMUST00000134937ENSMUST00000143981ENSMUST00000144342
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000038280 2.572±2.56 N/A 1.546±0.28 0.098±0.04 1.130±0.05 15.308±2.96 0.009±0.00 6.247±0.99 0.090±0.11 0.337±0.09 0.015±0.01 1.929±0.56 0.215±0.11 0.047±0.02
ENSMUST00000134937 0.632±0.00 0.039±0.02 0.632±0.12 N/A 0.527±0.00 N/A N/A N/A 0.061±0.08 0.314±0.00 N/A 1.210±0.73 0.061±0.01 0.013±0.01
ENSMUST00000143981 0.111±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000144342 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.246±0.00 0.426±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001IC CIL_0001IC_0002 CGP 2:132868305-132945906
CIL_0001J1 CIL_0001J1_0002 CGP 2:132904389-133562885

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005829 ISS cytosol
GO:0005886 IEA plasma membrane
GO:0005925 IDA focal adhesion
GO:0007155 ISS cell adhesion
GO:0030054 ISS cell junction
GO:0031941 IDA filamentous actin
GO:0042995 IEA cell projection
GO:0043616 ISS keratinocyte proliferation
GO:0051546 ISS keratinocyte migration
GO:0090162 ISS establishment of epithelial cell polarity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000052652 fermt1 fermitin family member 1 protein_coding Danio_rerio
ENSG00000101311 FERMT1 fermitin family member 1 protein_coding Homo_sapiens

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