C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: protein phosphatase 1, regulatory subunit 16B
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000101445 PPP1R16B 9606 + 20:38805705-38923024 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000299824 PPP1R16B-001 38805705-38923024 protein_coding
  ENST00000373331 PPP1R16B-004 38805724-38923024 protein_coding
  ENST00000463749 PPP1R16B-003 38838448-38895698 processed_transcript
  ENST00000468265 PPP1R16B-002 38836116-38895646 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000299824ENST00000373331
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000299824 7.998±0.00 6.983±0.00 4.198±0.00 18.237±3.98 3.560±0.00 1.942±1.17 0.748±0.42 N/A 0.507±0.00 2.849±2.00 N/A 0.436±0.21 1.057±0.05 0.258±0.07
ENST00000373331 N/A N/A N/A N/A 1.173±0.00 N/A 0.749±0.00 0.814±0.36 0.229±0.10 N/A 0.056±0.03 0.236±0.00 0.722±0.45 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00081Y CIL_00081Y_0001 VISTA 20:38219747-38821106
CIL_0004EB CIL_0004EB_0001 CGP 20:38748442-38923024
CIL_0003RW CIL_0003RW_0001 CGP 20:38805705-38953106

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI:IEA protein binding
GO:0005634 IDA nucleus
GO:0005886 NAS plasma membrane
GO:0007165 NAS signal transduction
GO:0019903 NAS protein phosphatase binding
GO:0051489 ISS regulation of filopodium assembly

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000079860 PPP1R16B protein phosphatase 1, regulatory subunit 16B protein_coding Danio_rerio
ENSMUSG00000037754 Ppp1r16b protein phosphatase 1, regulatory (inhibitor) subunit 16B protein_coding Mus_musculus

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