C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: protein phosphatase 1, regulatory (inhibitor) subunit 16B
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000037754 Ppp1r16b 10090 + 2:158665398-158766334 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000045503 Ppp1r16b-002 158667119-158766334 protein_coding
  ENSMUST00000052927 Ppp1r16b-001 158665398-158766334 protein_coding
  ENSMUST00000103116 Ppp1r16b-201 158666733-158766334 protein_coding
  ENSMUST00000129902 Ppp1r16b-003 158665398-158759334 retained_intron
  ENSMUST00000145073 Ppp1r16b-004 158696135-158766334 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000045503ENSMUST00000052927ENSMUST00000103116ENSMUST00000129902ENSMUST00000145073
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000045503 1.844±0.43 1.773±0.69 0.619±0.19 7.995±9.19 4.727±2.44 0.772±0.41 1.407±0.10 6.946±1.14 0.249±0.09 21.755±1.08 0.501±0.16 3.812±0.62 0.751±0.41 0.602±0.29
ENSMUST00000052927 N/A N/A N/A N/A N/A 0.172±0.00 N/A N/A N/A N/A N/A 1.160±0.00 0.094±0.00 0.088±0.00
ENSMUST00000103116 0.796±0.45 0.975±0.51 N/A 0.332±0.00 1.393±0.35 0.519±0.37 0.183±0.00 2.772±0.97 0.154±0.18 N/A 0.382±0.00 1.206±0.32 0.730±0.66 0.598±0.28
ENSMUST00000129902 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.084±0.00
ENSMUST00000145073 N/A N/A N/A N/A 1.533±0.00 0.434±0.00 N/A 1.202±0.00 0.175±0.10 N/A 0.368±0.16 1.882±0.26 0.279±0.08 0.180±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00081Y CIL_00081Y_0002 VISTA 2:158139041-158740388
CIL_0004EB CIL_0004EB_0002 CGP 2:158624888-158766334
CIL_0003RW CIL_0003RW_0002 CGP 2:158665398-158786637

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005634 ISS nucleus
GO:0005886 ISS plasma membrane
GO:0051489 ISS regulation of filopodium assembly

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000079860 PPP1R16B protein phosphatase 1, regulatory subunit 16B protein_coding Danio_rerio
ENSG00000101445 PPP1R16B protein phosphatase 1, regulatory subunit 16B protein_coding Homo_sapiens

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