C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RNA (guanine-7-) methyltransferase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000262173 RNMT-201 ENSG00000101654 9606 + 18:13731474-13764555 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000262173
Transcript ID Adrenal Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000262173 2.714±0.00 1.400±0.00 0.922±0.33 2.993±2.47 1.790±0.83 1.056±0.12 0.924±0.00 3.932±1.09 2.581±0.76 4.298±1.07

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005Q2 CIL_0005Q2_0002 CGP 18:13217498-13726663
CIL_0002FK CIL_0002FK_0002 CGP 18:13663347-13764558
CIL_0002FJ CIL_0002FJ_0002 CGP 18:13726660-13826743

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003723 IMP RNA binding
GO:0004482 IEA:IDA mRNA (guanine-N7-)-methyltransferase activity
GO:0005515 IPI protein binding
GO:0005634 IEA:IDA nucleus
GO:0005654 TAS nucleoplasm
GO:0005730 IDA nucleolus
GO:0005845 IDA mRNA cap binding complex
GO:0006366 TAS transcription from RNA polymerase II promoter
GO:0006370 IEA:IMP 7-methylguanosine mRNA capping
GO:0008152 IEA metabolic process
GO:0008168 IEA methyltransferase activity
GO:0010467 TAS gene expression
GO:0016032 TAS viral process
GO:0036265 IEA RNA (guanine-N7)-methylation
GO:0043235 IDA receptor complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000009679 Rnmt-001 protein_coding Mus_musculus 0 1216
ENSMUST00000151833 Rnmt-003 retained_intron Mus_musculus 0 830

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