C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: jade family PHD finger 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000102221 JADE3 9606 + X:46912276-47061242 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000424392 JADE3-002 46912276-47027976 protein_coding
  ENST00000455411 JADE3-003 46912796-47024783 protein_coding
  ENST00000611250 JADE3-201 46912276-47061242 protein_coding
  ENST00000614628 JADE3-001 46912433-47061241 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000424392ENST00000611250ENST00000614628
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000424392 N/A N/A N/A 0.409±0.00 N/A N/A N/A N/A 2.088±0.00 N/A N/A N/A N/A 7.093±0.00
ENST00000611250 N/A 1.212±0.00 0.231±0.00 0.279±0.00 1.383±0.00 0.323±0.00 N/A 0.999±0.43 0.617±0.40 1.487±0.00 0.684±0.00 2.371±0.00 4.385±0.00 4.242±0.55
ENST00000614628 2.199±0.00 1.819±0.00 0.155±0.00 1.420±0.00 1.967±0.00 1.707±1.33 1.035±0.66 1.779±0.00 0.734±0.54 0.582±0.05 0.249±0.00 2.241±0.84 3.821±2.33 2.625±1.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005G5 CIL_0005G5_0001 CGP X:46836940-47061242
CIL_0005G4 CIL_0005G4_0001 CGP X:46912276-47093314

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000123 IDA histone acetyltransferase complex
GO:0005515 IEA protein binding
GO:0008270 IEA zinc ion binding
GO:0043966 IDA histone H3 acetylation
GO:0043981 IDA histone H4-K5 acetylation
GO:0043982 IDA histone H4-K8 acetylation
GO:0043983 IDA histone H4-K12 acetylation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000019614 jade3 jade family PHD finger 3 protein_coding Danio_rerio
ENSMUSG00000037315 Jade3 jade family PHD finger 3 protein_coding Mus_musculus

Loading