C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: jade family PHD finger 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000037315 Jade3 10090 + X:20425688-20519939 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000043693 Jade3-201 20460527-20517896 protein_coding
  ENSMUST00000115384 Jade3-001 20425688-20519939 protein_coding
  ENSMUST00000136093 Jade3-002 20425788-20494586 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000043693ENSMUST00000115384ENSMUST00000136093
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000043693 0.214±0.00 N/A N/A 1.427±0.00 0.375±0.26 0.330±0.13 N/A 0.151±0.00 N/A 0.356±0.12 0.024±0.00 0.901±0.48 20.271±6.38 1.837±0.00
ENSMUST00000115384 0.534±0.19 0.348±0.11 2.878±0.45 1.325±0.70 0.287±0.14 0.350±0.26 0.211±0.04 0.439±0.10 1.278±1.20 0.919±0.11 0.077±0.03 1.573±1.37 31.573±2.79 1.857±0.76
ENSMUST00000136093 N/A 0.333±0.03 N/A 0.639±0.00 0.184±0.00 N/A N/A N/A 0.406±0.07 N/A 0.060±0.00 1.616±0.99 28.236±0.00 2.199±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005G5 CIL_0005G5_0002 CGP X:20364481-20519939
CIL_0005G4 CIL_0005G4_0002 CGP X:20425688-20562089

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000123 IEA histone acetyltransferase complex
GO:0003674 ND molecular_function
GO:0008270 IEA zinc ion binding
GO:0043966 ISS histone H3 acetylation
GO:0043981 ISS histone H4-K5 acetylation
GO:0043982 ISS histone H4-K8 acetylation
GO:0043983 ISS histone H4-K12 acetylation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000019614 jade3 jade family PHD finger 3 protein_coding Danio_rerio
ENSG00000102221 JADE3 jade family PHD finger 3 protein_coding Homo_sapiens

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