C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: jade family PHD finger 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000611250 JADE3-201 ENSG00000102221 9606 + X:46912276-47061242 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonKidneyLiverLungMuscleOvaryPlacentaTestisENST00000611250
Transcript ID Adrenal Bladder Brain Breast Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000611250 1.212±0.00 0.231±0.00 0.279±0.00 1.383±0.00 0.323±0.00 0.999±0.43 0.617±0.40 1.487±0.00 0.684±0.00 2.371±0.00 4.385±0.00 4.242±0.55

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005G5 CIL_0005G5_0001 CGP X:46836940-47061242
CIL_0005G4 CIL_0005G4_0001 CGP X:46912276-47093314

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000123 IDA histone acetyltransferase complex
GO:0005515 IEA protein binding
GO:0008270 IEA zinc ion binding
GO:0043966 IDA histone H3 acetylation
GO:0043981 IDA histone H4-K5 acetylation
GO:0043982 IDA histone H4-K8 acetylation
GO:0043983 IDA histone H4-K12 acetylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000115384 Jade3-001 protein_coding Mus_musculus 0 3768
ENSMUST00000043693 Jade3-201 protein_coding Mus_musculus 0 2516
ENSMUST00000136093 Jade3-002 retained_intron Mus_musculus 0 856

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