C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ubiquitin specific peptidase 11
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000102226 USP11 9606 + X:47232690-47248328 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000218348 USP11-201 47232866-47248327 protein_coding
  ENST00000377078 USP11-005 47233772-47241632 protein_coding
  ENST00000377080 USP11-004 47233392-47240868 protein_coding
  ENST00000377107 USP11-002 47232690-47248328 protein_coding
  ENST00000467378 USP11-001 47247082-47247952 retained_intron
  ENST00000469080 USP11-008 47233030-47248308 retained_intron
  ENST00000478596 USP11-003 47232984-47240371 retained_intron
  ENST00000480104 USP11-010 47242156-47244525 retained_intron
  ENST00000488848 USP11-007 47243396-47245325 retained_intron
  ENST00000489030 USP11-006 47241454-47242175 retained_intron
  ENST00000489111 USP11-009 47240402-47241178 retained_intron
  ENST00000497179 USP11-011 47244513-47247697 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000218348ENST00000377078ENST00000377080ENST00000478596ENST00000480104ENST00000497179
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000218348 13.311±0.00 23.480±0.00 1.950±0.00 76.286±58.51 3.937±2.45 4.478±2.68 4.641±2.81 25.237±0.00 3.853±2.30 9.908±8.46 5.749±4.26 28.187±21.64 17.099±5.95 61.507±17.52
ENST00000377078 N/A N/A 1.990±0.00 N/A N/A N/A N/A N/A 3.396±0.00 N/A N/A N/A N/A N/A
ENST00000377080 N/A N/A N/A N/A N/A 1.925±0.00 2.227±0.00 4.033±0.00 N/A 6.015±0.00 N/A 7.909±0.00 N/A N/A
ENST00000478596 N/A N/A N/A N/A N/A N/A N/A 1.725±0.00 N/A 2.860±0.00 N/A N/A N/A N/A
ENST00000480104 N/A N/A 2.712±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000497179 N/A 23.717±0.00 N/A N/A 8.133±0.00 N/A N/A N/A N/A N/A N/A 9.529±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005GD CIL_0005GD_0001 CGP X:47217860-47248328

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004197 TAS cysteine-type endopeptidase activity
GO:0004843 IEA:IDA ubiquitin-specific protease activity
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0006511 IEA ubiquitin-dependent protein catabolic process
GO:0016579 IDA protein deubiquitination
GO:0036459 IEA ubiquitinyl hydrolase activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000076303 usp11 ubiquitin specific peptidase 11 protein_coding Danio_rerio
ENSMUSG00000031066 Usp11 ubiquitin specific peptidase 11 protein_coding Mus_musculus

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