C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: ubiquitin specific peptidase 11
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000377078 USP11-005 ENSG00000102226 9606 + X:47233772-47241632 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderLiverENST00000377078
Transcript ID Bladder Liver
ENST00000377078 1.990±0.00 3.396±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005GD CIL_0005GD_0001 CGP X:47217860-47248328

Gene Ontology

GO IDEvidence TypeGO Description
GO:0006511 IEA ubiquitin-dependent protein catabolic process
GO:0036459 IEA ubiquitinyl hydrolase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000033383 Usp11-001 protein_coding Mus_musculus 0 946
ENSMUST00000149960 Usp11-003 retained_intron Mus_musculus 0 865
ENSMUST00000137101 Usp11-002 retained_intron Mus_musculus 0 665
ENSDART00000088808 usp32-001 protein_coding Danio_rerio 0.00002 55

Loading