C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ubiquitin specific peptidase 11
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000031066 Usp11 10090 + X:20703906-20720539 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000033383 Usp11-001 20703906-20720539 protein_coding
  ENSMUST00000127294 Usp11-004 20703934-20713153 processed_transcript
  ENSMUST00000137101 Usp11-002 20703960-20717685 retained_intron
  ENSMUST00000149960 Usp11-003 20711825-20720537 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000033383ENSMUST00000127294ENSMUST00000149960
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000033383 5.691±4.37 9.342±1.76 4.279±0.45 38.308±8.42 4.084±0.90 1.666±0.55 2.335±0.41 2.930±0.59 2.731±2.32 5.619±0.35 0.454±0.15 18.640±5.38 5.270±1.92 1.751±0.38
ENSMUST00000127294 N/A N/A N/A N/A N/A N/A N/A N/A 0.228±0.00 N/A N/A N/A N/A N/A
ENSMUST00000149960 N/A 2.210±0.56 1.348±0.04 5.124±0.37 1.085±0.00 0.348±0.00 0.248±0.00 0.568±0.00 0.506±0.42 1.070±0.00 0.201±0.06 4.571±0.00 1.114±0.00 0.275±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005GD CIL_0005GD_0002 CGP X:20687954-20720539

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004843 ISS ubiquitin-specific protease activity
GO:0005515 IEA protein binding
GO:0005634 ISS nucleus
GO:0005737 IEA cytoplasm
GO:0006511 IEA ubiquitin-dependent protein catabolic process
GO:0016579 ISS protein deubiquitination

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000076303 usp11 ubiquitin specific peptidase 11 protein_coding Danio_rerio
ENSG00000102226 USP11 ubiquitin specific peptidase 11 protein_coding Homo_sapiens

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