C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: LYR motif containing 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000102897 LYRM1 9606 + 16:20899868-20925006 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000219168 LYRM1-201 20900753-20925004 protein_coding
  ENST00000396052 LYRM1-001 20901104-20925006 protein_coding
  ENST00000412082 LYRM1-002 20900235-20925004 protein_coding
  ENST00000439021 LYRM1-202 20900235-20925004 protein_coding
  ENST00000562740 LYRM1-005 20900666-20924381 protein_coding
  ENST00000564457 LYRM1-007 20899868-20900491 processed_transcript
  ENST00000567165 LYRM1-003 20900411-20921463 nonsense_mediated_decay
  ENST00000567954 LYRM1-006 20900799-20924116 protein_coding
  ENST00000568663 LYRM1-008 20899902-20924263 protein_coding
  ENST00000568820 LYRM1-004 20900491-20922007 nonsense_mediated_decay
  ENST00000569023 LYRM1-009 20900450-20924116 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENST00000219168ENST00000412082ENST00000439021ENST00000567954
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENST00000219168 N/A N/A 7.956±0.00 N/A N/A 2.885±0.00 N/A N/A N/A 2.586±0.00 N/A N/A
ENST00000412082 N/A N/A 10.292±0.00 N/A N/A N/A N/A N/A N/A 4.404±0.00 11.510±0.00 17.495±0.00
ENST00000439021 10.855±0.00 13.465±0.00 N/A 17.920±0.00 14.823±0.00 21.370±0.00 14.002±4.89 32.121±0.00 9.647±0.00 1.368±0.00 19.378±0.00 N/A
ENST00000567954 N/A N/A 10.167±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003N2 CIL_0003N2_0001 CGP 16:20780193-20900349
CIL_0003MY CIL_0003MY_0001 CGP 16:20806429-20900384
CIL_0003N9 CIL_0003N9_0001 CGP 16:20854925-20925006
CIL_0003N5 CIL_0003N5_0001 CGP 16:20899868-21159441

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005634 IEA nucleus
GO:0005739 IEA mitochondrion

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000026281 lyrm1 LYR motif containing 1 protein_coding Danio_rerio
ENSMUSG00000030922 Lyrm1 LYR motif containing 1 protein_coding Mus_musculus

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