C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: cerebellin 1 precursor
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000102924 CBLN1 9606 - 16:49277917-49281831 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000219197 CBLN1-001 49277917-49281831 protein_coding
  ENST00000536749 CBLN1-201 49279312-49281562 protein_coding
  ENST00000564786 CBLN1-002 49279290-49281482 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartLiverLungOvaryPlacentaTestisENST00000219197ENST00000536749ENST00000564786
Transcript ID Adipose Adrenal Brain Breast Colon Heart Liver Lung Ovary Placenta Testis
ENST00000219197 1.559±0.00 N/A N/A 0.647±0.60 0.243±0.00 0.306±0.00 N/A 0.037±0.00 0.900±0.86 0.242±0.09 1.894±0.02
ENST00000536749 1.464±0.00 0.559±0.00 1.365±0.00 N/A 1.419±0.00 0.759±0.32 N/A N/A 0.832±0.00 0.222±0.00 10.735±5.20
ENST00000564786 N/A N/A N/A N/A 1.404±0.00 N/A 0.231±0.00 N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002VO CIL_0002VO_0001 CGP 16:48538726-49281831
CIL_0008WB CIL_0008WB_0001 VISTA 16:48760555-49361331
CIL_0002VP CIL_0002VP_0001 CGP 16:49277917-49399431

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005576 IEA extracellular region
GO:0007157 ISS heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules
GO:0007268 TAS synaptic transmission
GO:0007399 TAS nervous system development
GO:0009306 IEA protein secretion
GO:0021707 ISS cerebellar granule cell differentiation
GO:0030054 IEA cell junction
GO:0042803 IEA protein homodimerization activity
GO:0045202 IEA synapse
GO:0045211 IEA postsynaptic membrane
GO:0051965 IEA positive regulation of synapse assembly

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000057296 cbln1 cerebellin 1 precursor protein_coding Danio_rerio
ENSMUSG00000031654 Cbln1 cerebellin 1 precursor protein protein_coding Mus_musculus

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