C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: cerebellin 1 precursor protein
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000031654 Cbln1 10090 - 8:87468854-87472592 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000034076 Cbln1-201 87468854-87472592 protein_coding
  ENSMUST00000169693 Cbln1-202 87469238-87472386 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainColonHeartKidneyLiverMuscleOvaryPlacentaTestisENSMUST00000034076ENSMUST00000169693
Transcript ID Adipose Adrenal Bladder Brain Colon Heart Kidney Liver Muscle Ovary Placenta Testis
ENSMUST00000034076 0.014±0.00 0.622±0.22 0.012±0.00 6.785±4.01 0.169±0.06 0.267±0.11 0.109±0.04 0.066±0.01 N/A 0.298±0.15 0.536±0.38 1.506±0.49
ENSMUST00000169693 0.039±0.02 N/A N/A 7.309±0.00 0.108±0.08 0.154±0.06 0.043±0.02 0.040±0.03 0.043±0.00 0.161±0.08 0.170±0.11 0.988±0.64

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002VO CIL_0002VO_0002 CGP 8:86841139-87472592
CIL_0008WB CIL_0008WB_0002 VISTA 8:86970549-87571379
CIL_0002VP CIL_0002VP_0002 CGP 8:87468854-87589424

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005576 IEA extracellular region
GO:0007157 IGI heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules
GO:0009306 IMP protein secretion
GO:0021707 IGI cerebellar granule cell differentiation
GO:0030054 IEA cell junction
GO:0042803 IDA protein homodimerization activity
GO:0045202 IDA synapse
GO:0045211 IEA postsynaptic membrane
GO:0051965 IDA positive regulation of synapse assembly

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000057296 cbln1 cerebellin 1 precursor protein_coding Danio_rerio
ENSG00000102924 CBLN1 cerebellin 1 precursor protein_coding Homo_sapiens

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