C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cerebellin 1 precursor
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000536749 CBLN1-201 ENSG00000102924 9606 - 16:49279312-49281562 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainColonHeartOvaryPlacentaTestisENST00000536749
Transcript ID Adipose Adrenal Brain Colon Heart Ovary Placenta Testis
ENST00000536749 1.464±0.00 0.559±0.00 1.365±0.00 1.419±0.00 0.759±0.32 0.832±0.00 0.222±0.00 10.735±5.20

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002VO CIL_0002VO_0001 CGP 16:48538726-49281831
CIL_0008WB CIL_0008WB_0001 VISTA 16:48760555-49361331
CIL_0002VP CIL_0002VP_0001 CGP 16:49277917-49399431

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005576 IEA extracellular region
GO:0007157 ISS heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules
GO:0007268 TAS synaptic transmission
GO:0007399 TAS nervous system development
GO:0021707 ISS cerebellar granule cell differentiation
GO:0030054 IEA cell junction
GO:0045211 IEA postsynaptic membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000169693 Cbln1-202 protein_coding Mus_musculus 0 990
ENSMUST00000034076 Cbln1-201 protein_coding Mus_musculus 0 972
ENSDART00000112644 cbln2b-201 protein_coding Danio_rerio 0 243
ENSDART00000136200 cbln2b-001 protein_coding Danio_rerio 0 243

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