C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: EYA transcriptional coactivator and phosphatase 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000104313 EYA1 9606 - 8:71197433-71362232 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000303824 EYA1-010 71197439-71361860 protein_coding
  ENST00000340726 EYA1-001 71197433-71362232 protein_coding
  ENST00000388740 EYA1-201 71197435-71356689 protein_coding
  ENST00000388741 EYA1-012 71198128-71362136 protein_coding
  ENST00000388742 EYA1-002 71197433-71356678 protein_coding
  ENST00000388743 EYA1-011 71199069-71356609 protein_coding
  ENST00000419131 EYA1-005 71199320-71356486 protein_coding
  ENST00000422295 EYA1-007 71317659-71322461 retained_intron
  ENST00000465115 EYA1-003 71197433-71361731 nonsense_mediated_decay
  ENST00000493349 EYA1-008 71215495-71299108 nonsense_mediated_decay
  ENST00000496494 EYA1-004 71199241-71356633 retained_intron

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000303824ENST00000388740ENST00000388741ENST00000388742ENST00000388743ENST00000419131ENST00000422295ENST00000465115ENST00000493349ENST00000496494
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000303824 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.124±0.00
ENST00000388740 N/A N/A N/A 0.348±0.00 0.096±0.00 N/A N/A N/A N/A N/A N/A N/A 0.047±0.00 N/A
ENST00000388741 0.031±0.00 N/A N/A N/A 0.116±0.00 0.031±0.00 N/A 0.050±0.00 0.649±0.00 0.329±0.00 N/A 0.022±0.00 N/A 0.243±0.00
ENST00000388742 N/A N/A N/A 0.232±0.00 N/A N/A 1.960±0.00 N/A N/A N/A N/A 0.102±0.00 N/A N/A
ENST00000388743 N/A N/A N/A 0.410±0.10 N/A 0.140±0.12 0.998±0.09 N/A 0.411±0.39 N/A 0.470±0.00 0.103±0.00 0.018±0.00 0.754±0.00
ENST00000419131 N/A N/A N/A 1.156±0.00 N/A 0.087±0.00 0.813±0.00 N/A 1.715±0.00 0.299±0.11 N/A N/A 0.039±0.02 N/A
ENST00000422295 N/A N/A 1.754±0.00 N/A N/A 1.043±0.00 N/A N/A N/A N/A N/A N/A 0.218±0.00 N/A
ENST00000465115 N/A N/A N/A 0.362±0.00 0.265±0.00 N/A N/A N/A N/A 0.379±0.00 0.617±0.31 N/A 0.012±0.00 0.290±0.00
ENST00000493349 0.110±0.00 0.017±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000496494 N/A N/A N/A N/A N/A N/A 0.531±0.00 N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00012M CIL_00012M_0001 CGP 8:70669365-71362232
CIL_0007NF CIL_0007NF_0001 UCNEbase 8:70948735-71711907
CIL_0003F4 CIL_0003F4_0001 CGP 8:71197433-71844468

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000132 IEA establishment of mitotic spindle orientation
GO:0001656 IEA metanephros development
GO:0001657 IEA ureteric bud development
GO:0001658 IEA branching involved in ureteric bud morphogenesis
GO:0003151 IEA outflow tract morphogenesis
GO:0003723 IEA RNA binding
GO:0004725 IEA protein tyrosine phosphatase activity
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0006302 IMP double-strand break repair
GO:0006351 IEA transcription, DNA-templated
GO:0006470 IEA protein dephosphorylation
GO:0007275 IEA multicellular organismal development
GO:0007389 IEA pattern specification process
GO:0007605 TAS sensory perception of sound
GO:0009653 TAS anatomical structure morphogenesis
GO:0009887 IEA organ morphogenesis
GO:0010212 IDA response to ionizing radiation
GO:0014706 IEA striated muscle tissue development
GO:0016576 IDA histone dephosphorylation
GO:0016925 ISS protein sumoylation
GO:0034613 IEA cellular protein localization
GO:0035088 IEA establishment or maintenance of apical/basal cell polarity
GO:0035335 IEA peptidyl-tyrosine dephosphorylation
GO:0035909 IEA aorta morphogenesis
GO:0042471 IEA ear morphogenesis
GO:0042472 IEA inner ear morphogenesis
GO:0042473 IEA outer ear morphogenesis
GO:0042474 IEA middle ear morphogenesis
GO:0045165 IEA cell fate commitment
GO:0045664 IEA regulation of neuron differentiation
GO:0045739 IMP positive regulation of DNA repair
GO:0045747 IEA positive regulation of Notch signaling pathway
GO:0045944 IEA positive regulation of transcription from RNA polymerase II promoter
GO:0046872 IEA metal ion binding
GO:0048665 IEA neuron fate specification
GO:0048704 IEA embryonic skeletal system morphogenesis
GO:0048752 IEA semicircular canal morphogenesis
GO:0048856 IEA anatomical structure development
GO:0050679 IEA positive regulation of epithelial cell proliferation
GO:0060037 IEA pharyngeal system development
GO:0060487 IEA lung epithelial cell differentiation
GO:0071599 IEA otic vesicle development
GO:0071600 IEA otic vesicle morphogenesis
GO:0072513 IEA positive regulation of secondary heart field cardioblast proliferation
GO:0090103 IEA cochlea morphogenesis
GO:2001240 IEA negative regulation of extrinsic apoptotic signaling pathway in absence of ligand

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000014259 eya1 eyes absent homolog 1 protein_coding Danio_rerio
ENSMUSG00000025932 Eya1 eyes absent 1 homolog (Drosophila) protein_coding Mus_musculus

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