C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: EYA transcriptional coactivator and phosphatase 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000419131 EYA1-005 ENSG00000104313 9606 - 8:71199320-71356486 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainColonHeartLiverLungPlacentaENST00000419131
Transcript ID Brain Colon Heart Liver Lung Placenta
ENST00000419131 1.156±0.00 0.087±0.00 0.813±0.00 1.715±0.00 0.299±0.11 0.039±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00012M CIL_00012M_0001 CGP 8:70669365-71362232
CIL_0007NF CIL_0007NF_0001 UCNEbase 8:70948735-71711907
CIL_0003F4 CIL_0003F4_0001 CGP 8:71197433-71844468

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004725 IDA protein tyrosine phosphatase activity
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0006302 IMP double-strand break repair
GO:0006351 IEA transcription, DNA-templated
GO:0007275 IEA multicellular organismal development
GO:0007605 TAS sensory perception of sound
GO:0009653 TAS anatomical structure morphogenesis
GO:0010212 IDA response to ionizing radiation
GO:0016576 IDA histone dephosphorylation
GO:0016925 ISS protein sumoylation
GO:0035335 IEA peptidyl-tyrosine dephosphorylation
GO:0045739 IMP positive regulation of DNA repair
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000168081 Eya1-001 protein_coding Mus_musculus 0 1426
ENSMUST00000027066 Eya1-201 protein_coding Mus_musculus 0 1343
ENSMUST00000190337 Eya1-004 protein_coding Mus_musculus 0 1343
ENSMUST00000080664 Eya1-002 protein_coding Mus_musculus 0 1103
ENSMUST00000185453 Eya1-006 protein_coding Mus_musculus 0 763
ENSDART00000012253 eya1-201 protein_coding Danio_rerio 0 715
ENSDART00000134221 eya1-002 protein_coding Danio_rerio 0 656
ENSMUST00000188857 Eya1-007 protein_coding Mus_musculus 0 652
ENSDART00000081595 eya1-202 protein_coding Danio_rerio 0 627
ENSDART00000136443 eya1-001 protein_coding Danio_rerio 0 627
ENSMUST00000187790 Eya1-005 protein_coding Mus_musculus 0 418
ENSDART00000138119 eya1-003 processed_transcript Danio_rerio 0 248
ENSMUST00000185329 Eya1-003 retained_intron Mus_musculus 0 207
ENSDART00000142058 eya1-004 protein_coding Danio_rerio 0 206

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