C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ubiquitin-conjugating enzyme E2W (putative)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000104343 UBE2W 9606 - 8:73780097-73878910 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000419880 UBE2W-002 73792363-73878909 protein_coding
  ENST00000422906 UBE2W-003 73790605-73878875 nonsense_mediated_decay
  ENST00000517608 UBE2W-001 73786220-73878910 protein_coding
  ENST00000519255 UBE2W-007 73794042-73878860 nonsense_mediated_decay
  ENST00000519277 UBE2W-005 73793824-73878854 nonsense_mediated_decay
  ENST00000523278 UBE2W-004 73780097-73830474 protein_coding
  ENST00000602593 UBE2W-008 73792360-73878825 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000422906ENST00000517608ENST00000602593
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000422906 2.270±0.00 N/A 2.802±0.00 10.776±6.03 3.282±0.75 2.682±0.09 2.847±0.11 3.085±0.54 5.048±3.82 4.424±2.08 2.547±0.00 3.505±1.81 1.551±0.21 2.929±0.00
ENST00000517608 1.039±0.00 1.622±0.00 0.872±0.00 4.984±1.65 1.969±0.00 0.851±0.00 1.258±0.27 1.972±0.00 3.095±0.00 1.528±0.00 2.782±0.00 1.709±0.24 0.681±0.18 3.848±2.00
ENST00000602593 N/A N/A N/A N/A N/A N/A N/A N/A 1.424±0.00 3.297±0.00 N/A N/A 2.040±0.00 4.215±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001NO CIL_0001NO_0001 CGP 8:73420369-73878854
CIL_0005C4 CIL_0005C4_0002 CGP 8:73780097-73972287

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004842 IDA ubiquitin-protein transferase activity
GO:0005524 IEA ATP binding
GO:0005634 IEA nucleus
GO:0006281 IEA DNA repair
GO:0006513 IDA protein monoubiquitination
GO:0006515 ISS misfolded or incompletely synthesized protein catabolic process
GO:0016881 IEA acid-amino acid ligase activity
GO:0031625 IPI ubiquitin protein ligase binding
GO:0043161 ISS proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0070979 IDA protein K11-linked ubiquitination
GO:0071218 ISS cellular response to misfolded protein

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000044923 ube2w ubiquitin-conjugating enzyme E2W (putative) protein_coding Danio_rerio
ENSDARG00000045360 flj11011l hypothetical protein FLJ11011-like (H. sapiens) protein_coding Danio_rerio

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