C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ubiquitin-conjugating enzyme E2W (putative)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000517608 UBE2W-001 ENSG00000104343 9606 - 8:73786220-73878910 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000517608
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000517608 1.039±0.00 1.622±0.00 0.872±0.00 4.984±1.65 1.969±0.00 0.851±0.00 1.258±0.27 1.972±0.00 3.095±0.00 1.528±0.00 2.782±0.00 1.709±0.24 0.681±0.18 3.848±2.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001NO CIL_0001NO_0001 CGP 8:73420369-73878854
CIL_0005C4 CIL_0005C4_0002 CGP 8:73780097-73972287

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004842 IDA ubiquitin-protein transferase activity
GO:0005524 IEA ATP binding
GO:0005634 IEA nucleus
GO:0006281 IEA DNA repair
GO:0006513 IDA protein monoubiquitination
GO:0006515 ISS misfolded or incompletely synthesized protein catabolic process
GO:0016881 IEA acid-amino acid ligase activity
GO:0031625 IPI ubiquitin protein ligase binding
GO:0043161 ISS proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0070979 IDA protein K11-linked ubiquitination
GO:0071218 ISS cellular response to misfolded protein

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000117146 Ube2w-001 protein_coding Mus_musculus 0 2311
ENSMUST00000136455 Ube2w-004 retained_intron Mus_musculus 0 597
ENSMUST00000117112 Gm14932-001 processed_pseudogene Mus_musculus 0 449
ENSMUST00000182554 Ube2w-006 protein_coding Mus_musculus 0 401
ENSMUST00000133639 Ube2w-003 nonsense_mediated_decay Mus_musculus 0 350
ENSMUST00000182080 Ube2w-005 processed_transcript Mus_musculus 0 313
ENSMUST00000132919 Ube2w-002 retained_intron Mus_musculus 0 207

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