C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ubiquitin-conjugating enzyme E2W (putative)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000422906 UBE2W-003 ENSG00000104343 9606 - 8:73790605-73878875 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000422906
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000422906 2.270±0.00 2.802±0.00 10.776±6.03 3.282±0.75 2.682±0.09 2.847±0.11 3.085±0.54 5.048±3.82 4.424±2.08 2.547±0.00 3.505±1.81 1.551±0.21 2.929±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001NO CIL_0001NO_0001 CGP 8:73420369-73878854
CIL_0005C4 CIL_0005C4_0002 CGP 8:73780097-73972287

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000117146 Ube2w-001 protein_coding Mus_musculus 0 1866
ENSMUST00000133639 Ube2w-003 nonsense_mediated_decay Mus_musculus 0 346
ENSMUST00000182080 Ube2w-005 processed_transcript Mus_musculus 0 313
ENSMUST00000117112 Gm14932-001 processed_pseudogene Mus_musculus 0 263
ENSMUST00000182554 Ube2w-006 protein_coding Mus_musculus 0 241
ENSMUST00000136455 Ube2w-004 retained_intron Mus_musculus 0 233
ENSMUST00000132919 Ube2w-002 retained_intron Mus_musculus 0 206

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