C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: N-ethylmaleimide-sensitive factor attachment protein, alpha
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000594001 NAPA-002 ENSG00000105402 9606 - 19:47487680-47515058 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000594001
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000594001 17.773±0.00 20.649±0.00 24.215±0.00 24.881±0.00 14.575±0.00 12.806±0.00 29.847±0.00 29.925±0.00 22.217±0.00 12.304±0.00 14.348±0.06 25.930±6.97

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000449 CIL_000449_0002 CGP 19:47487637-47555856

Gene Ontology

GO IDEvidence TypeGO Description
GO:0006886 IEA intracellular protein transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000006181 Napa-001 protein_coding Mus_musculus 0 789
ENSMUST00000150208 Napa-006 retained_intron Mus_musculus 0 446
ENSMUST00000127637 Napa-002 processed_transcript Mus_musculus 0 315
ENSMUST00000139507 Napa-005 retained_intron Mus_musculus 0 294

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