C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: N-ethylmaleimide-sensitive factor attachment protein, alpha
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000263354 NAPA-001 ENSG00000105402 9606 - 19:47487637-47515240 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000263354
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000263354 44.325±0.00 41.204±0.00 8.229±0.00 49.051±18.91 27.042±23.21 19.850±13.96 21.962±17.62 36.354±20.95 37.903±33.25 32.571±24.73 47.094±30.53 42.569±32.19 38.943±22.32 36.597±25.36

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000449 CIL_000449_0002 CGP 19:47487637-47555856

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000149 IEA SNARE binding
GO:0005515 IPI protein binding
GO:0005829 TAS cytosol
GO:0006886 IEA intracellular protein transport
GO:0006891 TAS intra-Golgi vesicle-mediated transport
GO:0006892 TAS post-Golgi vesicle-mediated transport
GO:0007420 IEA brain development
GO:0010807 IEA regulation of synaptic vesicle priming
GO:0016020 IDA membrane
GO:0019905 IEA syntaxin binding
GO:0030182 IEA neuron differentiation
GO:0035249 IEA synaptic transmission, glutamatergic
GO:0035494 IEA SNARE complex disassembly
GO:0045176 IEA apical protein localization
GO:0061024 TAS membrane organization
GO:0061025 TAS membrane fusion
GO:0070044 IEA synaptobrevin 2-SNAP-25-syntaxin-1a complex
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000006181 Napa-001 protein_coding Mus_musculus 0 1179
ENSMUST00000127637 Napa-002 processed_transcript Mus_musculus 0 470
ENSMUST00000124563 Napa-003 retained_intron Mus_musculus 0 459
ENSMUST00000150208 Napa-006 retained_intron Mus_musculus 0 446
ENSMUST00000132828 Napa-004 processed_transcript Mus_musculus 0 392
ENSMUST00000139507 Napa-005 retained_intron Mus_musculus 0 294

Loading