C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: N-ethylmaleimide-sensitive factor attachment protein, alpha
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000597274 NAPA-011 ENSG00000105402 9606 - 19:47493083-47515091 nonsense_mediated_decay

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastHeartLungMuscleOvaryPlacentaTestisENST00000597274
Transcript ID Breast Heart Lung Muscle Ovary Placenta Testis
ENST00000597274 14.300±0.00 5.380±0.00 18.994±0.00 19.018±0.00 16.476±0.00 11.438±0.00 24.051±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000449 CIL_000449_0002 CGP 19:47487637-47555856

Gene Ontology

GO IDEvidence TypeGO Description
GO:0006886 IEA intracellular protein transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000127637 Napa-002 processed_transcript Mus_musculus 0 512
ENSMUST00000006181 Napa-001 protein_coding Mus_musculus 0 387
ENSMUST00000124563 Napa-003 retained_intron Mus_musculus 0 224
ENSMUST00000132828 Napa-004 processed_transcript Mus_musculus 8e-37 158
ENSMUST00000139507 Napa-005 retained_intron Mus_musculus 3e-36 156

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