C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: AVL9 homolog (S. cerevisiase)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000105778 AVL9 9606 + 7:32495426-32588721 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000318709 AVL9-003 32495489-32588721 protein_coding
  ENST00000409301 AVL9-001 32495526-32586166 protein_coding
  ENST00000446718 AVL9-002 32543255-32588711 protein_coding
  ENST00000459629 AVL9-004 32495521-32539269 processed_transcript
  ENST00000467779 AVL9-007 32580763-32584206 retained_intron
  ENST00000470500 AVL9-008 32580207-32584167 retained_intron
  ENST00000485228 AVL9-005 32495426-32552250 processed_transcript
  ENST00000497020 AVL9-006 32580791-32586108 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000318709ENST00000409301ENST00000446718ENST00000459629
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000318709 3.667±0.00 2.515±0.00 0.992±0.00 4.612±1.43 2.573±0.39 1.829±0.52 1.201±0.63 1.935±0.57 1.539±0.00 1.639±0.31 1.052±0.00 2.964±0.41 2.219±0.54 2.230±1.21
ENST00000409301 N/A N/A 0.745±0.00 1.355±0.00 2.823±0.00 1.809±0.00 0.497±0.00 N/A 1.403±0.00 2.484±0.00 0.916±0.00 3.687±0.00 N/A 1.089±0.00
ENST00000446718 N/A 1.235±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000459629 N/A N/A 0.529±0.00 N/A 1.154±0.00 0.869±0.00 0.218±0.00 0.334±0.00 0.777±0.00 0.681±0.00 N/A 1.216±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003FD CIL_0003FD_0001 CGP 7:32485332-32588721
CIL_0003FC CIL_0003FC_0001 CGP 7:32495426-32894131

Gene Ontology
GO IDEvidence TypeGO Description
GO:0016021 IEA integral component of membrane
GO:0016477 IDA cell migration
GO:0055037 IDA recycling endosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000055538 avl9 AVL9 homolog (S. cerevisiase) protein_coding Danio_rerio
ENSMUSG00000029787 Avl9 AVL9 homolog (S. cerevisiase) protein_coding Mus_musculus

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