C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: AVL9 homolog (S. cerevisiase)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000318709 AVL9-003 ENSG00000105778 9606 + 7:32495489-32588721 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000318709
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000318709 3.667±0.00 2.515±0.00 0.992±0.00 4.612±1.43 2.573±0.39 1.829±0.52 1.201±0.63 1.935±0.57 1.539±0.00 1.639±0.31 1.052±0.00 2.964±0.41 2.219±0.54 2.230±1.21

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003FD CIL_0003FD_0001 CGP 7:32485332-32588721
CIL_0003FC CIL_0003FC_0001 CGP 7:32495426-32894131

Gene Ontology

GO IDEvidence TypeGO Description
GO:0016021 IEA integral component of membrane
GO:0016477 IDA cell migration
GO:0055037 IDA recycling endosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000031805 Avl9-001 protein_coding Mus_musculus 0 2706
ENSMUST00000177249 Avl9-002 retained_intron Mus_musculus 0 854
ENSMUST00000176560 Avl9-003 retained_intron Mus_musculus 0 850

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