C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: AVL9 homolog (S. cerevisiase)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000029787 Avl9 10090 + 6:56714927-56761911 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000031805 Avl9-001 56714927-56761911 protein_coding
  ENSMUST00000176560 Avl9-003 56740913-56754052 retained_intron
  ENSMUST00000177249 Avl9-002 56714938-56737157 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000031805ENSMUST00000176560
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000031805 4.302±1.24 4.823±1.06 4.378±0.38 9.022±3.83 3.294±0.89 8.980±2.11 0.989±0.14 4.410±0.26 2.054±0.47 5.311±0.86 0.527±0.07 5.104±1.47 4.858±1.41 1.617±0.77
ENSMUST00000176560 N/A N/A N/A N/A N/A 6.343±0.00 N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003FD CIL_0003FD_0002 CGP 6:56701063-56761911
CIL_0003FC CIL_0003FC_0002 CGP 6:56714927-56797813

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0016021 IEA integral component of membrane
GO:0016477 ISS cell migration
GO:0055037 ISS recycling endosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000055538 avl9 AVL9 homolog (S. cerevisiase) protein_coding Danio_rerio
ENSG00000105778 AVL9 AVL9 homolog (S. cerevisiase) protein_coding Homo_sapiens

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