C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Gene Info | |||||
|---|---|---|---|---|---|
| Description: | pentatricopeptide repeat domain 1 | ||||
| Gene Accession | Gene Name | Tax ID | Strand | Position | Gene Biotype |
ENSG00000106246  |
PTCD1 | 9606 | - |
7:99416739-99466163  |
protein_coding |
| Transcript Accession | Transcript Name | Position | Transcript Biotype | ||
| ENST00000292478 |
PTCD1-001 | 99416739-99438916 | protein_coding | ||
| ENST00000419981 |
PTCD1-002 | 99434925-99438755 | protein_coding | ||
| ENST00000430029 |
PTCD1-004 | 99434810-99438647 | protein_coding | ||
| ENST00000430982 |
PTCD1-007 | 99433380-99466163 | protein_coding | ||
| ENST00000485746 |
PTCD1-005 | 99429098-99435019 | processed_transcript | ||
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0005LD | CIL_0005LD_0002 | CGP | 7:99392048-99419616 |
| CIL_0004TK | CIL_0004TK_0001 | CGP | 7:99408641-99466163 |
Gene Ontology |
||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0000049 | IDA | tRNA binding |
| GO:0005739 | IDA | mitochondrion |
| GO:0005759 | ISS | mitochondrial matrix |
| GO:0042780 | IDA | tRNA 3'-end processing |
| GO:0044822 | IDA | poly(A) RNA binding |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Description | Biotype | Species | |
|
ENSDARG00000076176
|
ptcd1 | pentatricopeptide repeat domain 1 | protein_coding | Danio_rerio | |
|
ENSMUSG00000029624
|
Ptcd1 | pentatricopeptide repeat domain 1 | protein_coding | Mus_musculus | |
