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C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | pentatricopeptide repeat domain 1 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000292478  |
PTCD1-001 |
ENSG00000106246 |
9606 | - |
7:99416739-99438916  |
protein_coding |
|
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Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0005LD | CIL_0005LD_0002 | CGP | 7:99392048-99419616 |
| CIL_0004TK | CIL_0004TK_0001 | CGP | 7:99408641-99466163 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0000049 | IDA | tRNA binding |
| GO:0005739 | IDA | mitochondrion |
| GO:0005759 | ISS | mitochondrial matrix |
| GO:0042780 | IDA | tRNA 3'-end processing |
| GO:0044822 | IDA | poly(A) RNA binding |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000031628
|
Ptcd1-001 | protein_coding | Mus_musculus | 0 | 1500 |
|
ENSMUST00000160840
|
Bud31-007 | processed_transcript | Mus_musculus | 0 | 220 |
|
ENSMUST00000160075
|
Bud31-004 | protein_coding | Mus_musculus | 0 | 220 |
|
ENSMUST00000159018
|
Bud31-003 | protein_coding | Mus_musculus | 0 | 220 |
|
ENSMUST00000162308
|
Bud31-002 | protein_coding | Mus_musculus | 0 | 220 |
|
ENSMUST00000162594
|
Bud31-001 | protein_coding | Mus_musculus | 0 | 220 |
|
ENSMUST00000078259
|
Nsl1-001 | protein_coding | Mus_musculus | 0.00000000008 | 75 |
